| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0609 |
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| Symbol | |
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| ID | 5693433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 679115 |
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| End bp | 680416 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641263195 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_001528496 |
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| Protein GI | 158520626 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00990459 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTGG TAGACATACT GAGCGAACGG GGGTTTGTGG AGGCCTTTAC CCACGAGCAG
GAGCTGCGGG ACCTGGCCGC TGAATCGGCC GTCACCTGCT ACATCGGGTT TGATCCCACG
GCCTCCAGCC TGCACGTGGG CAGCCTGGTG CCCATCATGG CCCTGGCCCA CATGCAGCGA
AACGGTCACC GGCCCATCGC CCTGGTGGGC GGCGGCACCG GCCTGGTGGG GGATCCCAGC
GGCAAGACCG AGATGCGCCA GCTGATCACG CCGGAAACGG TTGAAGCAAA CATTGAAGGT
ATTCAGCGCC AGCTTTCGCG GTTTATTGAT TTTGACGGCG GTAAAGCCCT GCTGGTGAAC
AACGCGGACT GGCTGACCGG CCTGGAGTAC ATTCCATTTT TACGGGACAT CGGCCGGCAC
TTTTCCGTGA ACCGGATGAT CAAGGCCGAG AGCTACCGCA TGCGGCTGGA GTCCGAGGAG
GGGCTGAGCT TTATCGAGTT CAACTACATG CTCCTGCAGG CCTACGACTT TCTCAAGCTG
TGCGGGGACC GGGACTGCGT GCTCCAGATG GGCGGCAGCG ACCAGTGGGG CAATATCGTG
GCCGGCATCG ACCTGGTCCG GCGGGTGCTC AACCGCCAGG TGTACGGGCT CACCTTTCCC
CTGATCACCA CCAGCAGCGG TGCCAAGATG GGAAAAACCG CTGCCGGCGC GGTCTGGCTG
GATGCTGAAC GTACCAGCCC GTATGATTAT TACCAGTACT GGATCAACAC CGACGATCAG
GACGTGGCGC GGTTTCTTTC CCTGTTTACC TTTCTGCCCA TGCCGGAAAT CCAGGAAGTC
AAGCGGATCA GCGGCGCCGA CCTTAACAGC GCCAAAGCGG TGCTGGCCTT TGAGGCCACA
CGCATCGCCC ACGGCACGGA TGCGGCGGTC CAGGCCCACA GCGACGCCGC CGTCAATTTC
GGGCGGCGCG ATATTCCACA GGACCTGCTG CCCTCCAGCA CCATACCGCG GGACGCGGAG
GGAACCGGGG CCGCTGTATC GGGAACCGCG CCGCAGACGG AGATGACCAT GGCCGAACTG
TCCGAGGGCA TACCGGCCTT TGTTCTGTTT CACACGGTGG GGTTGGCCGA CAGCAAAGGC
CAGGCCCGGC GGCTGATTCA GCAGGGCGGC GGGTATGTCA ACGACCGGCG CATCGAATCC
GATGAATACC GGGTTTCCGC CGAGGACCTG GACGACGCAA AGATCGTGCT GCGGGCCGGA
AAAAAGCGGT ATCACACGAT TGTGGTGCGC AAGGGCGCTT AG
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| Protein sequence | MSVVDILSER GFVEAFTHEQ ELRDLAAESA VTCYIGFDPT ASSLHVGSLV PIMALAHMQR
NGHRPIALVG GGTGLVGDPS GKTEMRQLIT PETVEANIEG IQRQLSRFID FDGGKALLVN
NADWLTGLEY IPFLRDIGRH FSVNRMIKAE SYRMRLESEE GLSFIEFNYM LLQAYDFLKL
CGDRDCVLQM GGSDQWGNIV AGIDLVRRVL NRQVYGLTFP LITTSSGAKM GKTAAGAVWL
DAERTSPYDY YQYWINTDDQ DVARFLSLFT FLPMPEIQEV KRISGADLNS AKAVLAFEAT
RIAHGTDAAV QAHSDAAVNF GRRDIPQDLL PSSTIPRDAE GTGAAVSGTA PQTEMTMAEL
SEGIPAFVLF HTVGLADSKG QARRLIQQGG GYVNDRRIES DEYRVSAEDL DDAKIVLRAG
KKRYHTIVVR KGA
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