Gene Dole_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0553 
Symbol 
ID5693377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp619063 
End bp619743 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content53% 
IMG OID641263139 
ProductFHA domain-containing protein 
Protein accessionYP_001528440 
Protein GI158520570 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGGC GTGAAATCGA CGATACCCTT AACCTGGATA AGGAAGCCCT TGACTTTGTC 
GAGCAGGAAA AGTTTCAGGT GGAGGAGAAA GTCATCTACT CCGGACGCAA AAAAGGGGCC
TGCATTGTCT TTATCACCGG CCCGTCCAGG GGCAATGTGG TGGCCGCACA CAAGGGAACC
ATGACCATCG GCCGGGACCA GGCATCGGAC ATTGTCATCA ACAAGCAGTA TGTTTCCAAA
AAGCACGCGC AGATCATCTC TTCAGAAGAT GGGGCGAAAA TTGTTGACTG CAAAAGCACC
AACGGCACTT TTCTCAACGA CACTCTCATT GAACAGGCCG AACTTAAGGA TCGTGACGAG
ATCAAGATCG GCAGCGTGAT TATGCAGTAC TTCCGTATCG ACCTGAATGA CGCGGACCAG
GAGCGTATCC CAGCGGTTTT GGAGGACCAG AAACCATCGG CGTTTTATAA CAAGGTATTT
GCCGAGGTTC AGCCCTTTTT CGGCCAGATG ACCGGCCGGT TCCTGGATCG CCAGATTCGG
TCCCACCTGG GCAAGAGCCC CGGCACCCTT GAGTTTTCAG ACAGGGAGAG CCTGGCAAGA
TGGCTCCGTA TTTCAGCTGG CCTGCTGATG AATGAAAAAA TCGCCGATAC CCTGGCGGAA
AAGATCCTGG CATTAGAGTA G
 
Protein sequence
MTRREIDDTL NLDKEALDFV EQEKFQVEEK VIYSGRKKGA CIVFITGPSR GNVVAAHKGT 
MTIGRDQASD IVINKQYVSK KHAQIISSED GAKIVDCKST NGTFLNDTLI EQAELKDRDE
IKIGSVIMQY FRIDLNDADQ ERIPAVLEDQ KPSAFYNKVF AEVQPFFGQM TGRFLDRQIR
SHLGKSPGTL EFSDRESLAR WLRISAGLLM NEKIADTLAE KILALE