Gene Dole_0495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0495 
Symbol 
ID5693316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp562967 
End bp564208 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content58% 
IMG OID641263078 
ProductSte24 endopeptidase 
Protein accessionYP_001528382 
Protein GI158520512 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGAA TCGGCTGGAT AATTCTTGTG TTGCTGTGTG TGCATTACGG GGTGGAGCGG 
CTGGCCGATC TTCTCAACCT CAGGGCCCTC TCCCGGAAAG TGCCGCCATC TTTTGCCGGA
TGGTATGACC CGGACCGTCA TGCAAAATCC CGGGCCTACC TGAAAAACAC CACCGGCCTG
GCCATGGTGG AAGCATCCGT GGATCTGGCA ATCCTGCTGG CCTTCTGGTC CGCCCGGGGT
TTTAGCTTTC TGGACCGGTG GGTGTCCGGC CTCGGCTTTT CACCAATTGT TTCCGGGCTG
GTGTTTATCG GGGTTCTGGT CAGCGCCCGG GCAGTTTTTT CTCTTCCTTT TTCCATCTAT
TCAACCTTTG TGATAGAGGA GCGGTTCGGG TTCAACCGCA CCACCTGGCC ACTTTTCCTT
AGCGACCGGA TCAAGAGCCT GTTTCTGGCC CTTCTGCTGG GCGCGCCCCT GCTGACCGGC
CTGCTGTGGT TTTTTGAAAA CCTTGGGAAA ACGGCCTGGC TCTGGTGCTG GATCGGGTTC
TGCCTGGTGG TGCTGGTGCT ACAGGTGGTG GTGCCGGCAT GGATTCTGCC GCTGTTTAAC
CGGTTTACCC CCCTTGAACC CGGGGACCTG AAAAACGCCG TGCTGGCCTG TGCCCGGGCC
GCGGGCTTTC CCGTTCAAAC CGTTTTTGTG ATGGATGGAT CAAAACGGAG CGCAAAATCC
AACGCTTTTT TTGCCGGCCT GGGCCGGCAC CGGCGTCTGG TGCTGTTTGA CACGCTGATT
GACAACCATC CTGTTTTCGA AGTCGTGGCG GTTGTGGCCC ATGAAATCGG CCACTACAAA
AAGAGACACC TGCAGTGGCA AACCCTTGCG GCCATGGGCC AGGCCGGGGT GATGTTTTTT
CTGCTGTCGG TGGCGGTCTC GTGGCCGGAT CTTTTTACCG CCTTTTATGT CTCCAATGTG
TCGGTGTATG GAGGGCTGGT CTTTTTTTCC ATTCTCTATG GTCCGGTAGC CTGGGCCCTG
GGCCTGCCGG TCCAGGCGCT GTCCCGGCAC CACGAGTACC AGGCCGACGC CTTTGCCGTG
AACCTTACCG GTAACGGCCC GGCCCTGGCC GATGCCCTGA AGCGGCTCTC CGCGGACAAC
ATGGCAAACC TCACCCCCCA TCCTTTTTAC GTGCTGCTGC ACTACTCCCA TCCACCGGTA
ATCGATAGAG TACAGGCGAT TGAGAAACAC GAGGGCCACT AA
 
Protein sequence
MTGIGWIILV LLCVHYGVER LADLLNLRAL SRKVPPSFAG WYDPDRHAKS RAYLKNTTGL 
AMVEASVDLA ILLAFWSARG FSFLDRWVSG LGFSPIVSGL VFIGVLVSAR AVFSLPFSIY
STFVIEERFG FNRTTWPLFL SDRIKSLFLA LLLGAPLLTG LLWFFENLGK TAWLWCWIGF
CLVVLVLQVV VPAWILPLFN RFTPLEPGDL KNAVLACARA AGFPVQTVFV MDGSKRSAKS
NAFFAGLGRH RRLVLFDTLI DNHPVFEVVA VVAHEIGHYK KRHLQWQTLA AMGQAGVMFF
LLSVAVSWPD LFTAFYVSNV SVYGGLVFFS ILYGPVAWAL GLPVQALSRH HEYQADAFAV
NLTGNGPALA DALKRLSADN MANLTPHPFY VLLHYSHPPV IDRVQAIEKH EGH