| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0490 |
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| Symbol | |
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| ID | 5693311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 554441 |
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| End bp | 559078 |
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| Gene Length | 4638 bp |
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| Protein Length | 1545 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641263073 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_001528377 |
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| Protein GI | 158520507 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.290236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCA ATATAATCAA ATGTGATGGC AAAACAGGAC CGGGCCGTGC CGTTCGGACG
GTCGTCTGTC TTTTTGTTCT CCTGCTGGTC ATGTCTTTTT CCGCTGTCGG CGCCTGGGCC
GGTGATTTTG GAAGAAATCA GGACGCTGGC GACACGGCGG ACCGTGCCAG ACGTTATTCT
CTTGATTTTT CAGGGTCTGG CCAGAACGAC GAGTGGGACT GGGACTATGA CTGGATTAAA
TTTAGCCTGG ATCAGACTGC GGAGGTGACG TTTACCCTCA CCAATGACAG CCGGTACTCA
TATCTGAGAG TTACCAACGG TGCCACCGAC CTCCTCGGCG ACTGGGTTGC GGCAAACACC
ACTCAGGTTC TCACCCTGTC GCCGGGTCTC TATTATGTGT GTGTGGCTGC CTATCCCAAC
GGCATTTTTA CCAGAACACG ATATACCCTG TCCATTAGCG CGGTGTATGG CACCGCCTGC
TACCTGGACG CGGACGGTGA CGGTTACGGC GATCCGACGG ATGTGATTTA TAACGCTTCC
TGCCCTGCCG GACGGGTGGC CAACGACGAC GACTGCGATG ACACCGACCC GGCCAAATGG
TCCGGTGCCC TGGATATCTG CGACGGCATT GATAACGACT GCGACGGTGA TGTTGATGAA
GATTGTGCCA CCTACTATCG GGACACGGAC GGTGACGGGT ACGGGGATCC GGGCCATACC
GCCAGTGCCC CGGCCGCCGG GTTTGTCACG CTTTCCGGTG ACTGTGATGA CACGAATTCG
GCCATAAACC CCGGCGCCAC AGAGGTGTGC GACGGCATCG ACAACAACTG CGACGGCGCT
GTCGACGATA TCAATCTCTG GTACTACCTG GATGAAGACG GGGACGGTTA CGGCGACCCT
GCCGGTGAGT TAAAGCCGTG CAGCCTTACC GGGTATGAGG GGTATGTGGA CAACGGCCTG
GATTGTGATG ATTTTGACGC CGCCATCCAT CCCGGCGCCA CAGAGATCTG CAACAACCTG
GATGACAACT GCGACGGTGC TATCGACGAA GGGCTGCCGG TGGTGACCTA CTATTATGAC
CAGGACGGTG ACGGGTGGGG CATTCCCACC AACAGCCAGT CCGGCTGCAC TCCGCCGTCC
GGTAATTATG TAGAGGCCGA TGACGCGGAC GGTGACGGCA CCGATGACTT TGACTGCAAT
GACGAAAATC CCCGCATTCA TCCCGGAGCT TTTGATCCCT GCAACACAAC CATTGATGAA
AACTGCGCCA ATGGCATGGA CGACTGCGAA GAATCGCCAG CCGGCTGCGC CAACCTGGCC
GATTATCCCC TGGAAACCCG GGCGATTTCG GCAAACCCCA TGGTGGAGTT TCTGTTTGAC
GACTCCGGCA GTATGGCATG GGAGGTGATG CATAAGGGCA CGTATAATGG CAAGTTTTAC
TATCAGTATT ATTACAGGGG GGTGCGCTCC GCCAGTGTGT CGGATGTGTT TAATACCACT
TCGTCCACGG ACCGGTCTTT TTATCAGACC CAGTGTGCCG ATGAAAACAG TCTGTACTAC
AACCCGGAAT ACAGTTACGT GCCCTGGCCG GGCCACACTC CGGCCGATCC GGACAGACCC
AAGAAGTCGC CTGACAGCAG CGACACCATA ACCATGAATG ATAATTTTTC CTCCATCGGC
ATCAGCAATG CCCACTATTT TGTAAAGGAC GGGGGCAATG TCTATCTGGT GGATCTGGAT
TCCTCCGGCG TCCGATATTA TACGGTGAGT TACGAAACCG GATCTTACTA CTACGGTCGG
GTCAACAGTG TCTCGTTGAT AGGGAGCGCG CCCACCGGTG TCAATATTGG GTCCCTGGCC
GAGGCGCGCC AGAACTTTGC AAACTGGTTC CAGTTCTACC GGACCCGGCA GAACACGGCA
AAGGCATCGA TCCTGCAGGT GGTAAACAGC CTCAGCGGGG TAAAGATCGG TGTGCACACC
ATTAACGGCA ACAACAGCAT CACCATTCCC AATACGGGCA TGCTTTCCGT GGATGACAAC
AAGGCCACCA TCCTTGGCTA TATAGAGGAC GTCGGCGCAT ACAGCGGCAC CCCATTGCGA
CTGGGACTCA AGGCGGTGGG CAACTTTTTC GCGGGCGACT ACAGCGGCGT TGATTCGCCC
TATTCTACTG TGGCGGCTGG CGGCGAGTGC CAGGCGGCAT TTGCCATTGT GATGACCGAC
GGTTACTACA ATGGATCGAA TCCCGGTATC GGCAATGCGG ATGCCGATGA TGCCAACAAT
GATTTTGACG GCCCGCCGTT TGCCGACAGT TACAGCGATA CCCTGGCTGA CGTGGCCATG
TATTTTTACA AAAACGACCT GCGTGATGAT CTGGCAGACG CCGTACCCAC CAACGAATAT
GACCAGGCCA CGCATCAGCA CCTGGTAACC TACGGCGTCT GCTTCGGCCT GGTGGGGACC
GAAGACCCCG CCGACTACCC CAACTGCCCT GCCGGCGGCA CCGGTGCCTG CCCCGATCCC
TGGCCCAGCC CGGGGACCGA TGAGGGACCG GGACGGATCG ACAATCTCTA CCATGCCGCG
ATAAACGGCC GGGGAAAGTT TATCTCGGCG TCCAACCCAT TGCAGCTGGT AGAGGCCATT
AGAGCCATTA TGGACGATGT GGTGGCGCGG AGAGGGTCCG GCGCGTCAGT GGCGGTGAGC
ACCCAGTCGC TGAAGGAAGA CACCCTGCTT TTCCAGGGGT CCTATGATTC GGCCGGGTGG
AAGGGCGACC TGCGGGCCTA CTCCATCAGC ATGATGACCG GGTTGATCAA TCCGAACCAT
GTCTGGTCGG CGGCCGCCGG TCTGGACGCG CTGACCGACA CAGAGGCCAA GGCCAGAAAC
ATCTTTACAT ATGACGGCTC CACCGGTGTT GCCTTTTCCT ATGACAACCT CTCCGAAGAC
CAGCAAAGCA GCTTGGGTGA AACCGAGACC GATCAGCGGC TGGTGGTCGA TTTTATTAAA
GGGGACCGGT CAAAGGAGCA GAATAATGAG AACGGGCTGT TCAGAATCCG GCGAAGCCGC
ATGGGAGATA TTGTCCACTC TGCGCCGGTT CACGTGGGCG ACACAATTTA CGTGGGCGGC
AACGACGGCA TGCTGTATGC CTTCAACGCC CTGACCGGCG CCGAACGGTT TGCCTATATT
CCGGAGCATC TGTATCCTTA CTCCAAGCTT TATAAGCTGG CCGACCCCAA CTACATTCAC
AAGTTCTACG TGGATAACAC GACTTTTGTT CGTAATGACC TGCTGGTCTG CGGACTGGGC
AGGGGGGCGA AGGGGTATTT CGCCCTGGAC GTGTCAAACC CGTCGGGCTT TACTGCTTCA
GACGTACTGT GGGAGTATCC AGCCGTGACC TATGACGGCA CTGAGTCCGA CCCGGACATG
GGTTACACCT TTTCCCGGCC GGCTGTGGTG CCGTGCGGAG CCTACGGCGA TGTACTGATA
TTCGGAAACG GATACAGCAG CACCAACCAG GAGGCCGTAC TCTATGTGAT TGACATCGAT
GACACGGACG GTTCTTTTGA GGAAAGCGAT GTGAAAAAGA TTTATACCGG CGTGGGCAGC
ACAGGCACAG GGGTGTGCAA CGGCCTGTCC ACCCCCACCC TGATCGATAC CGACCAGGAC
GGGGACCTGG ACATCGTCTA TGCCGGAGAC CTGCAGGGCA ATCTGTGGAA ATTTGATCTG
TCCGGCACAA AAGATACATG GGCGGTGGCC TGCAAGGATT CAAGCGGAAA CCCCAAACCA
CTGTTTCAGG CAAAAGATGA GAGCGGTAAT GTTCAGCCCA TCACCACCAA GCCGGCTGTG
ACCAAGCACT GTGCCGGTCT TGGCTACATG GTGGCCTTTG GTACGGGCCA GTTTATGGCT
GAGGGCGATT TTGCCGATAT GTCCACTCAG GCCCTTTACG GCATATGGGA CTGGGAAAAT
GCCTGGGCCG CGGCGGATGA TGAACTCTCT GCCGACCAGC TGGACAGAAT GCATTATGGG
TACCTGCGGG CCCCCAGCAG CGGTGTTCGC CTGTTCTCGG AGATTGAGGC CAGCGGCATG
TTTGCCTCCC CCAATCCGGA GGTCTCGCTG ACACTGGTGA AACAGAGCCA GGTGTCTCTG
TCTTCCAGCG AGCGGGTCAC CAGTGAAAAC GATGTCAACT GGTTTTCGCC GGACAAGTGG
GTGGCCCAGC GGGAAGCGGG AGAGACGCCT TACTCCGGGG GCCAGCATGT GGGATGGTAC
CTGGAGTTTC CGTCCGGCGG CGGCGAACGG GTCATTTCCG ACCCCCAGAT TCGAAGCTCC
AAAACAGGCA ACCTGCTGAT CTTCATGTCC CTGGTGCCCT CCATAGAGGT GTGCCGGGCC
GGCGGATACT CTATCTTCAA CGTGCTGGAT GCGTGTACCG GGAAATGGGA AAAAGGCGTC
GTGCTGGATG ATATCTACTA TAAGCCGCCG ATTATTGACC CGCCGGAACC GCCGCCGCCG
TTGGATGACG ACGATGATAA TGATGATGGC TATATCGGTG ATCCGGACAG TTCTCTTGTC
CCCTATGACC CCGGCAACCC GCCGGAGACC ATTGAAGGGG AAAAGAAGGG CATGGTGTTC
TGGCGGTTTA TCATGTAG
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| Protein sequence | MNRNIIKCDG KTGPGRAVRT VVCLFVLLLV MSFSAVGAWA GDFGRNQDAG DTADRARRYS
LDFSGSGQND EWDWDYDWIK FSLDQTAEVT FTLTNDSRYS YLRVTNGATD LLGDWVAANT
TQVLTLSPGL YYVCVAAYPN GIFTRTRYTL SISAVYGTAC YLDADGDGYG DPTDVIYNAS
CPAGRVANDD DCDDTDPAKW SGALDICDGI DNDCDGDVDE DCATYYRDTD GDGYGDPGHT
ASAPAAGFVT LSGDCDDTNS AINPGATEVC DGIDNNCDGA VDDINLWYYL DEDGDGYGDP
AGELKPCSLT GYEGYVDNGL DCDDFDAAIH PGATEICNNL DDNCDGAIDE GLPVVTYYYD
QDGDGWGIPT NSQSGCTPPS GNYVEADDAD GDGTDDFDCN DENPRIHPGA FDPCNTTIDE
NCANGMDDCE ESPAGCANLA DYPLETRAIS ANPMVEFLFD DSGSMAWEVM HKGTYNGKFY
YQYYYRGVRS ASVSDVFNTT SSTDRSFYQT QCADENSLYY NPEYSYVPWP GHTPADPDRP
KKSPDSSDTI TMNDNFSSIG ISNAHYFVKD GGNVYLVDLD SSGVRYYTVS YETGSYYYGR
VNSVSLIGSA PTGVNIGSLA EARQNFANWF QFYRTRQNTA KASILQVVNS LSGVKIGVHT
INGNNSITIP NTGMLSVDDN KATILGYIED VGAYSGTPLR LGLKAVGNFF AGDYSGVDSP
YSTVAAGGEC QAAFAIVMTD GYYNGSNPGI GNADADDANN DFDGPPFADS YSDTLADVAM
YFYKNDLRDD LADAVPTNEY DQATHQHLVT YGVCFGLVGT EDPADYPNCP AGGTGACPDP
WPSPGTDEGP GRIDNLYHAA INGRGKFISA SNPLQLVEAI RAIMDDVVAR RGSGASVAVS
TQSLKEDTLL FQGSYDSAGW KGDLRAYSIS MMTGLINPNH VWSAAAGLDA LTDTEAKARN
IFTYDGSTGV AFSYDNLSED QQSSLGETET DQRLVVDFIK GDRSKEQNNE NGLFRIRRSR
MGDIVHSAPV HVGDTIYVGG NDGMLYAFNA LTGAERFAYI PEHLYPYSKL YKLADPNYIH
KFYVDNTTFV RNDLLVCGLG RGAKGYFALD VSNPSGFTAS DVLWEYPAVT YDGTESDPDM
GYTFSRPAVV PCGAYGDVLI FGNGYSSTNQ EAVLYVIDID DTDGSFEESD VKKIYTGVGS
TGTGVCNGLS TPTLIDTDQD GDLDIVYAGD LQGNLWKFDL SGTKDTWAVA CKDSSGNPKP
LFQAKDESGN VQPITTKPAV TKHCAGLGYM VAFGTGQFMA EGDFADMSTQ ALYGIWDWEN
AWAAADDELS ADQLDRMHYG YLRAPSSGVR LFSEIEASGM FASPNPEVSL TLVKQSQVSL
SSSERVTSEN DVNWFSPDKW VAQREAGETP YSGGQHVGWY LEFPSGGGER VISDPQIRSS
KTGNLLIFMS LVPSIEVCRA GGYSIFNVLD ACTGKWEKGV VLDDIYYKPP IIDPPEPPPP
LDDDDDNDDG YIGDPDSSLV PYDPGNPPET IEGEKKGMVF WRFIM
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