| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0440 |
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| Symbol | |
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| ID | 5693260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 508158 |
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| End bp | 510020 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641263022 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001528327 |
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| Protein GI | 158520457 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000968749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAAT TACTTGCCAA GGAACCGGGA AAAGAGATGC TGCTCTTGGG CAACGAGGCC
CTGGCCCGGG GCGCCCTGGA GGCGGGTGTG GGGTTTGCCT CCACCTATCC GGGAACGCCA
TCCTCGGAGC TGTCGCTCAA TTTTTTCCAG ATCTCCCGGG AGACCGACCT CTATTTTGAA
TACAGCACCA ACGAAAAGGT GGCCCTGGAA GTGGCGGCCG CTGCCGCCAA CTGCGGGGTG
CGCAGCATGT GCGTGATGAA GCACGTGGGC GTGAACGTGG CGGCCGACGC CCTGATGACC
CTGGCCTATG TGGGCGTCAA GGCCGGCATG GTGCTGTTGT CCGCCGACGA TCCCCACATG
TTTTCCAGCC AGAACGAGCA GGACAACCGC TATTACGGCA AGCTTTCCGG CCTGCCCGTG
GTCGAGCCCT CCTCCGTGGC CGAGGCAAAA GAGATGGCCG TTTACGCCTT TGAAGTCTCC
GAGGCCCTGG GCGAGCCGGT GATCCTGCGC ACCACCACCC GGGTCAACCA TTCATCGGCC
AAGGTGGCGC TGGGCAGCCT TCCTGAAAAG GTCAAAACCG AGGGCCAATT TGAAAAGGAC
CCGTTTAATT ACGTTACCGT GCCGGCGGTT TCCAGAAAGC TTCATGTCCG GCTGCTGGAA
CGTCTGAAAA AGGCCGCCGA CCTGTCCAAT ACATCGCCTT ACAATATTCG CACCGGCAAG
GGCCGATATG GCATCATTTG TAACGGGGTG AGTTATTTTT ACGTTACCGA CGCGTTAAAG
GCCCTGGGCC GGGAGAGCGA TTTTTCCGTG CTGCGCGTCG GGTTTTCCAA CCCCATGCCC
GACGCCCTGG TCAAGGCGTT TCTGGCCGAC TGCGACAGGG TGCTGGTGGC CGAAGAGGGT
GAGCCCTTCA TGGAAGAGGC GGTCAAGGCC ATGGCCGCCG AGGAAAAGCG GTGCATTGAT
ATCGCGGGCA AGCGGGAAGA CCTGTTTTCC CGGCTCTCCG AGTTTGATCC CCAGCTGGTG
GCCCGCTGCA TTGCCCGCTA TTTTGATATT CCTTACACAC CGCCGACGCC GGCGGATATG
TCCGGCGTGC CCGAGATTCC CCAGAGGCCC CCCAACCTGT GCGCGGGCTG CTCCCACCGG
GCCACCTTTT ACGCGGTAAA AAAAGCCGCG GAAGGGTATG ACACGATCTT TCCCACGGAC
ATCGGGTGCT ACACCCTGGG GTTTCTGCCG CCGCTCTCCA TGGGCGATTT TCTGATCTGC
ATGGGATCTT CCGTGGGCAC GGCCTGCGGG TTTTCCCGGG CATCGAACCA GAAGGTGGTG
GCCTTTATCG GGGATTCCAC CTTTTTCCAT TCCGGCATTC CGGCCCTGAT CAACGGGGTG
TTCAACAACC ACGACTTTAC CCTGGTGATC CTGGACAACG GCACCACCGC CATGACCGGG
CACCAGCCAC ACCCCGGCGT GGACATGGAC GAGCTCAATT TTTCCGGTTT TCAGCGGGTC
TCCATCGAGG CACTGGTCAA AGGCGCCGGC GTTCAGCACG TGTCAGTGAT CCGGCCCTAC
AACCTGAAAA AAAGTATTGA GGCGATTCGG GAGGCCATTG AATTCAAGGG CGTTTCCGTG
GTCATTGCAC GGGAAGAGTG CGTGCTCAAG GCCAAAAGCC TCAAGCGGGG AAGCGCCCGG
GTTTTTTACG TGAGCGACCG GTGCAAAAAC CACCGGGACT GCATCAACAC CCTGGCCTGC
CCGGCTTTTT ACGTGGCGGA CGGCCGGGTG CAAATCAACC CCAATCTGTG CGCCGGGTGC
GCGGTGTGCG TTCAGGTGTG CCCGGAGAAG GCCATTGTGC CGGTAAAACA GGATCAGAAG
TAA
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| Protein sequence | MHKLLAKEPG KEMLLLGNEA LARGALEAGV GFASTYPGTP SSELSLNFFQ ISRETDLYFE
YSTNEKVALE VAAAAANCGV RSMCVMKHVG VNVAADALMT LAYVGVKAGM VLLSADDPHM
FSSQNEQDNR YYGKLSGLPV VEPSSVAEAK EMAVYAFEVS EALGEPVILR TTTRVNHSSA
KVALGSLPEK VKTEGQFEKD PFNYVTVPAV SRKLHVRLLE RLKKAADLSN TSPYNIRTGK
GRYGIICNGV SYFYVTDALK ALGRESDFSV LRVGFSNPMP DALVKAFLAD CDRVLVAEEG
EPFMEEAVKA MAAEEKRCID IAGKREDLFS RLSEFDPQLV ARCIARYFDI PYTPPTPADM
SGVPEIPQRP PNLCAGCSHR ATFYAVKKAA EGYDTIFPTD IGCYTLGFLP PLSMGDFLIC
MGSSVGTACG FSRASNQKVV AFIGDSTFFH SGIPALINGV FNNHDFTLVI LDNGTTAMTG
HQPHPGVDMD ELNFSGFQRV SIEALVKGAG VQHVSVIRPY NLKKSIEAIR EAIEFKGVSV
VIAREECVLK AKSLKRGSAR VFYVSDRCKN HRDCINTLAC PAFYVADGRV QINPNLCAGC
AVCVQVCPEK AIVPVKQDQK
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