| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0434 |
|---|
| Symbol | |
|---|
| ID | 5693253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 500753 |
|---|
| End bp | 502417 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641263015 |
|---|
| Product | alkaline phosphatase domain-containing protein |
|---|
| Protein accession | YP_001528321 |
|---|
| Protein GI | 158520451 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCCT TGGATCGTGG CGATCTGGAT GCGCTCTACG AAGCCCAGAA GCGGCACGCC
CCTGGAGTGC TGGGCGACAA CGCTACAAAG GAATTCGTCC TGCGACATGT TTTTGAGATT
GCCCCGGAAC TCATCCGCAA ACCGTCCGAT TTACTGCGGG CGCTGCTGCG CCGCCACTAT
CGGGAGCAGC GCATCCCAGC TTTGCTTGAT GAGCGCTTTG TTCAGGTGCT ACGCCAACAG
GGCGATTTTG AAGAGTGGCC CCTCGAAACA ATTATCCCAG ATCGGGAAGC CTTTTTCGCT
TTCCTCCAGG AACGCTGGCC CGTTTTTCTA AATCAGTCGG CGATCCAGGA TGCCACCGGA
GTTCGCGAGG ATGAGAAGCC CTACGGCTTT GAATATCCCG GCCCTTCGGA TTTGCCCTTC
GACCATGACG ACATCCGTGT CTACATTGAC AACCTGTTTG TCGAAGGATT GCTTGAAGCG
GTTCCCCATG ATTGGGCTGA GTCACTCTCC AAGACCTGGC TCGCCATTGG CATCCGAACT
GATCAGCAGG CGGACCGGGC GAGGCGCGTG GAGGGACTAC TCGATAACTT GTCGGCCGAT
ATTCCTAATG AGGACACACG ACACGACGAC TGGTTCCACT TTGCCAAAAC CTGGGCGGAG
CTGGTGGCTC TGGCGCTGGA TTCGAATGCG GTGCTGCCGG AGCCGGCGCG TCAGAAGATG
GAGGCGCTTC AAGCTCAGAT AGATGCCGTA CTCGTACCGT GGCTGACAAA ACGCTACGCA
GGATTGGTCA ACCTGCCCCC GGCTCCACCG GTCATGCTCC ACCATATTCC CCGTTTCCTC
TCCCGACACA TCAACGACGC CAAGCAACAC AAGGCTGCGT TCGTCCTGGT CGATGGTCTT
GCGATGGATC AGTGGATCGT CATCCGAAAG GAAATCGCCA GGCAGCGAGC CAATTACCGC
TTTCGTGAGA ACGCGGTGTT CGCCTGGATA CCGACCATCA CTTCTGTTTC GCGCCAGGCG
GCCTTTGCAG GAAAGCCACC GATCTATTTT CCGAACAGCA TCCACACCAC CGACAAAGAA
CCGGCCCTAT GGACGCAATT TTGGGTGGAC CAGGGGCTGA CAAAGCAGGA AGTCGCATAT
GCCAAGGGGC TGGGGAACGG CACCTTGGAA AATGTGGAGG AGATTGTTGC TCGGCCCAAG
ATGCGGGTGG TCGGTCTGGT TGTCGACAAA GTGGACAAGA TCATGCACGG CATGGAGCTT
GGCGCTGCAG GGATGCACAA CCAGGTTCGC CAGTGGGCCG CAGGACCGTT CTTGGCGCAA
CTGTTCGACT TGCTTCTGGA GAATGGATTC CGTGTCTACC TGTCGTCGGA TCACGGCAAT
ATCGAGGCGT CTGGTTGCGG GCGGCCCGTT GAAGGAGCCG TGGCGGATCT GCGCGGAGAA
CGCGCTCGGA TTTATCCCGA TTCCTTACTA CGAGGTCAGG TTAAGGAACG ATTCCCAAAC
GCTCTGGAGT GGCCGCCTAT CGGGCTGCCG GAGGAATATC TACCCCTGCT TGCTCCGGCT
CGATCGGCGT TTGTCCGGAA GGCCGAAAGC CTTGTCGGGC ATGGCGGCGC TTCTCTTGAA
GAGCTCATCG TCCCTCTTGT TCAAATCGAG AGGAGGGACA CATGA
|
|---|
| Protein sequence | MTALDRGDLD ALYEAQKRHA PGVLGDNATK EFVLRHVFEI APELIRKPSD LLRALLRRHY
REQRIPALLD ERFVQVLRQQ GDFEEWPLET IIPDREAFFA FLQERWPVFL NQSAIQDATG
VREDEKPYGF EYPGPSDLPF DHDDIRVYID NLFVEGLLEA VPHDWAESLS KTWLAIGIRT
DQQADRARRV EGLLDNLSAD IPNEDTRHDD WFHFAKTWAE LVALALDSNA VLPEPARQKM
EALQAQIDAV LVPWLTKRYA GLVNLPPAPP VMLHHIPRFL SRHINDAKQH KAAFVLVDGL
AMDQWIVIRK EIARQRANYR FRENAVFAWI PTITSVSRQA AFAGKPPIYF PNSIHTTDKE
PALWTQFWVD QGLTKQEVAY AKGLGNGTLE NVEEIVARPK MRVVGLVVDK VDKIMHGMEL
GAAGMHNQVR QWAAGPFLAQ LFDLLLENGF RVYLSSDHGN IEASGCGRPV EGAVADLRGE
RARIYPDSLL RGQVKERFPN ALEWPPIGLP EEYLPLLAPA RSAFVRKAES LVGHGGASLE
ELIVPLVQIE RRDT
|
|---|
| |