| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0427 |
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| Symbol | |
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| ID | 5693246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 492516 |
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| End bp | 493892 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641263008 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001528314 |
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| Protein GI | 158520444 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATAC AAAACCCTTC TCACATTCTG ATTGTCGACG ACGATCTGAA CCACTTGAAA
ACGCTTCAAA CCATCGTCAG AAGTTGGGGC TACCAGGTGT CCACGGCCGA CGATGGGGTC
AAGGCCGTTG ACACCGTCAA AGAAAGACCG TTCGCCCTGA TCTTGATGGA TGTGCGCATG
GCTCAGATGA GCGGCATCGA GGCCCTGAAG CAAATTAAAC AGTACAATCC GGCCATCCCG
ATTCTCATCA TGACCGCATA CTCTTCGGTT GATTCGGCGG TAGAGGCCTT AAAATCCGGG
GCTTACGATT ATTTGACCAA ACCCCTGGAC TTTGAAGTGC TCAAAATCAG CCTAGCGCGT
GCTTTGGAGC ATTCCGGCCT CAAGGCGGAA AATGCAACCT TAAAATCAAA GATGAGCGCA
GATTACGAGC TGGAAAATAT CATCGGAAGA AGCCGGCCGA TGAAGGAACT GGTCGACATG
ATGTCCATGG TTGCGCCTTC GGAGGCAACC GTGCTGATCA CCGGGGAAAG CGGGACCGGC
AAAGAGCTGA TCGCCAAATC CATCCATCAC AACAGCCAGC GCAAGGATCG CGCCCTGGTG
GTGGTCAATT GCGCGGCACT TACAGAGACA TTACTGGAGT CGGAGCTGTT CGGCCATGAA
AAAGGTGCGT TTACCGGTGC CGATAAACGC CGCGAGGGCA GATTCAAGCA GGCTGACAAG
GGAACCATTT TTCTGGATGA GATCGGCGAA ACCTCCGCCG CGATGCAGGC CAAGCTGCTG
CGGGTCATTC AAGAGCGGGA AATCCAGCGG GTCGGCGGGG AAGAAACGTT GAGCGTGGAT
GTGCGGATTC TTGCCGCGAC CAACCGAAAC CTGGAGGAGG ATGTGAAAAA CGGAAAATTC
CGTGAAGACC TTTTCTATAG ACTGAACGTC GTCACGCTGC GCATCCCGCC GCTGCGCGAG
CGTCAAGATG ATACTCCTTT ACTTGCCCAG CATTTCTTGG AGAAGTACGC GAAAAAAAAT
CACAAGCAGG TCAAAGGCTT TTCTCCGTTG GCAATGGATA TGCTGCTAAA ATACGCTTGG
CCCGGCAATG TCAGGGAACT TGAAAACGTC ATTGAGCGTG CCGTGATTCT CCTGCCGGAT
GAACACATCA CAGAGAAAGA GCTGCCTGTC ACCATCACCT CAAGTTATGC CGAAAAAAGC
GAATGGGTGG CTCCGCCCCC ACCGGTTGCA GCCAATCGCC CCCTGGAAGA AGTTGAAAAG
GAGGCCATTT TGGCCACACT TGATGACAGT GGCGGGAATA AAAGCGAAAC CGCACGCAGG
CTCGGAATCA ACCGCAAAAC CCTTCACAAG AAACTCAAAG ATTATGGAAT AGATTGA
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| Protein sequence | MTIQNPSHIL IVDDDLNHLK TLQTIVRSWG YQVSTADDGV KAVDTVKERP FALILMDVRM
AQMSGIEALK QIKQYNPAIP ILIMTAYSSV DSAVEALKSG AYDYLTKPLD FEVLKISLAR
ALEHSGLKAE NATLKSKMSA DYELENIIGR SRPMKELVDM MSMVAPSEAT VLITGESGTG
KELIAKSIHH NSQRKDRALV VVNCAALTET LLESELFGHE KGAFTGADKR REGRFKQADK
GTIFLDEIGE TSAAMQAKLL RVIQEREIQR VGGEETLSVD VRILAATNRN LEEDVKNGKF
REDLFYRLNV VTLRIPPLRE RQDDTPLLAQ HFLEKYAKKN HKQVKGFSPL AMDMLLKYAW
PGNVRELENV IERAVILLPD EHITEKELPV TITSSYAEKS EWVAPPPPVA ANRPLEEVEK
EAILATLDDS GGNKSETARR LGINRKTLHK KLKDYGID
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