Gene Dole_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0402 
Symbol 
ID5693221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp462871 
End bp463692 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content63% 
IMG OID641262983 
ProductABC-3 protein 
Protein accessionYP_001528289 
Protein GI158520419 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAGG CCCTGCACTA CGACTTCATG CAAAACGCCC TGGCCGCCGG CCTGCTGGCC 
GCCGTGATCT GCGGCATCAT GGGCTCCCTG GTGGTGGTCA ACCGCATCGT GTTTCTCTCC
GGCGGCATTG CCCACGCGGC CTTCGGCGGT ATCGGCATGG CCTTTTTCTT CGGCTGGTCC
TTTCTGGCCG GCACCCTGGG GTTTGCCCTG GTTGCGGCCC TGATCATGGC CGGGATCACC
CTGCGGGCCA AACACCGGGC CGACACCATC ATCGGCGTGA TCTGGGCCGT GGGCATGGCC
ATCGGCGTGG TGCTCCTGGA CCTGACGCCG GGATACAACG TGGACCTGAT GAGTTACCTG
TTCGGCAGCA TTCTCACGGT GCCGGAAAAG GACCTGTGGA TCATGGCGGG TCTGGGGCTG
GGGATTTCGG TGCTGGTGGT TTTCTTCTAC AACGACCTTC TGGCCATCTC CTATGACGAG
GAGTTTGCCC GGGTGCGGGG CGTGGCCGTG GGGCCGATCT ATTTTATGAT GATCGGCATG
CTGGCGGTCT CCATCGTGAT GGTGATCCAG GTGGTGGGCC TGATCCTGGT GATCGCCCTG
CTCACCATTC CCCCCTTTAT CATGGAAAAA TACGCTCGGT CCCTGGCCCG CATGATGATC
GGCTCCAGCC TGCTGGGCAT TCTCTTCACC CTGGCCGGGC TGTGGCTCTC CTACGCCTTT
GACCTGACCT CGGGCGCGGC CATCATCCTG GTGGCCGGCG CCGCCTTCTT TCTCTTCCTG
CTGATCGAAA AGGTCCGGCT GATGGCCCGG CAACGGCTGT AG
 
Protein sequence
MIEALHYDFM QNALAAGLLA AVICGIMGSL VVVNRIVFLS GGIAHAAFGG IGMAFFFGWS 
FLAGTLGFAL VAALIMAGIT LRAKHRADTI IGVIWAVGMA IGVVLLDLTP GYNVDLMSYL
FGSILTVPEK DLWIMAGLGL GISVLVVFFY NDLLAISYDE EFARVRGVAV GPIYFMMIGM
LAVSIVMVIQ VVGLILVIAL LTIPPFIMEK YARSLARMMI GSSLLGILFT LAGLWLSYAF
DLTSGAAIIL VAGAAFFLFL LIEKVRLMAR QRL