Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0402 |
Symbol | |
ID | 5693221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 462871 |
End bp | 463692 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641262983 |
Product | ABC-3 protein |
Protein accession | YP_001528289 |
Protein GI | 158520419 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGAGG CCCTGCACTA CGACTTCATG CAAAACGCCC TGGCCGCCGG CCTGCTGGCC GCCGTGATCT GCGGCATCAT GGGCTCCCTG GTGGTGGTCA ACCGCATCGT GTTTCTCTCC GGCGGCATTG CCCACGCGGC CTTCGGCGGT ATCGGCATGG CCTTTTTCTT CGGCTGGTCC TTTCTGGCCG GCACCCTGGG GTTTGCCCTG GTTGCGGCCC TGATCATGGC CGGGATCACC CTGCGGGCCA AACACCGGGC CGACACCATC ATCGGCGTGA TCTGGGCCGT GGGCATGGCC ATCGGCGTGG TGCTCCTGGA CCTGACGCCG GGATACAACG TGGACCTGAT GAGTTACCTG TTCGGCAGCA TTCTCACGGT GCCGGAAAAG GACCTGTGGA TCATGGCGGG TCTGGGGCTG GGGATTTCGG TGCTGGTGGT TTTCTTCTAC AACGACCTTC TGGCCATCTC CTATGACGAG GAGTTTGCCC GGGTGCGGGG CGTGGCCGTG GGGCCGATCT ATTTTATGAT GATCGGCATG CTGGCGGTCT CCATCGTGAT GGTGATCCAG GTGGTGGGCC TGATCCTGGT GATCGCCCTG CTCACCATTC CCCCCTTTAT CATGGAAAAA TACGCTCGGT CCCTGGCCCG CATGATGATC GGCTCCAGCC TGCTGGGCAT TCTCTTCACC CTGGCCGGGC TGTGGCTCTC CTACGCCTTT GACCTGACCT CGGGCGCGGC CATCATCCTG GTGGCCGGCG CCGCCTTCTT TCTCTTCCTG CTGATCGAAA AGGTCCGGCT GATGGCCCGG CAACGGCTGT AG
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Protein sequence | MIEALHYDFM QNALAAGLLA AVICGIMGSL VVVNRIVFLS GGIAHAAFGG IGMAFFFGWS FLAGTLGFAL VAALIMAGIT LRAKHRADTI IGVIWAVGMA IGVVLLDLTP GYNVDLMSYL FGSILTVPEK DLWIMAGLGL GISVLVVFFY NDLLAISYDE EFARVRGVAV GPIYFMMIGM LAVSIVMVIQ VVGLILVIAL LTIPPFIMEK YARSLARMMI GSSLLGILFT LAGLWLSYAF DLTSGAAIIL VAGAAFFLFL LIEKVRLMAR QRL
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