Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0362 |
Symbol | |
ID | 5693181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 416327 |
End bp | 417550 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641262943 |
Product | major facilitator transporter |
Protein accession | YP_001528249 |
Protein GI | 158520379 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGCC CGCTTCCCGA CAACCCGCCT TCCCCTCCCG CCCGGATGCG CTTTCTTGGC GTGCTGCCCA CAGGTATCTG GGTGCTGGGT CTGGGGTCGA TGTTCATGGA TATCTCTTCG GAGATGATTC ACAGCCTGCT GCCCGTGTTC ATGGTCTCGG TGCTGGGCGC TTCCATGGTC ACGGTGGGCG TCATTGAGGG GATTGCCGAG GCCACCGCCG CCATCACCAA GGTTTTTTCC GGCGTACTCA GCGACTACCT GGGCAGGCGA AAACGCCTGC TGGTTGCCGG CTATGCGCTG GCGGCGTTGA CCAAACCTGT ATTCCCCCTG GCCAACGCCA TCGGCTGGGT GCTGGCCGGC CGGTTCGTGG ATCGCATAGG AAAGGGCATT CGCGGCGCAC CGCGCGATGC CATGGTGGCC GATATCACGC CGCCCCAGCT ACGGGGCGCG GCCTACGGGC TGCGCCAGGC CCTGGACTCG CTGGGCGCTT TTCTCGGTCC TTTGCTGGCC GTGGTGCTGA TGCTCTGGCT GGCCGGCAAC ATCCGGGCCG TGATGTGGGT TGCCGTTGTG CCCGCCTTTA TCACGGTGGG GCTGCTGGTG TTTTACCTGC GCGAACCCGA ACGCGCATCC ATCGCCAGCC CGGTATCGCC CCTGGCCGGG GCCCAGCGGC TGCCGGGGCG ATTCTGGATG GTGGTGCTGC TGGGCGGGGT GTTCACACTG GCGCGTTTCA GCGAGGCGTT TCTGGTGCTG CGCGCCCAGG ACGTGGGGCT GGCCCTTGCC TACGTGCCGG TGGTGATGAT GATCATGAAT GTCTTTTACG CGGGATTTGC CTATCCACTG GGTGCGGCCG CTGATCGCGT CAACCGGCGT ACACTGCTGC TGGCCGGGCT GGGCCTGCTG ATAGGGGCCG ACCTGGTGCT GGCAGTTGCC GCCTCTCCGC TGACGGTTTT TATCGGTGCC GGCCTCTGGG GACTGCACAT GGCATGCACC CAGGGACTGC TGTCCAAGCT TGTCGCCGAC ACGGTTCCCG CGGATCTGCG CGGCACGGCC TTCGGCATCT TCAACCTGAT AAGCGGCGGG GCCCTGCTGC TGGCCAGCAT TATTGCCGGC GCTTTGTGGA GCGCCTTCGG CCCGGGAGCC ACCTTTACCG CCGGCGCCGC CTTTGCCTTG CTTGCCGCCT GCGGCCTGAT TGCCTACGGC GTAAAGCCTC AGGCCGCAAA ATGA
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Protein sequence | MNSPLPDNPP SPPARMRFLG VLPTGIWVLG LGSMFMDISS EMIHSLLPVF MVSVLGASMV TVGVIEGIAE ATAAITKVFS GVLSDYLGRR KRLLVAGYAL AALTKPVFPL ANAIGWVLAG RFVDRIGKGI RGAPRDAMVA DITPPQLRGA AYGLRQALDS LGAFLGPLLA VVLMLWLAGN IRAVMWVAVV PAFITVGLLV FYLREPERAS IASPVSPLAG AQRLPGRFWM VVLLGGVFTL ARFSEAFLVL RAQDVGLALA YVPVVMMIMN VFYAGFAYPL GAAADRVNRR TLLLAGLGLL IGADLVLAVA ASPLTVFIGA GLWGLHMACT QGLLSKLVAD TVPADLRGTA FGIFNLISGG ALLLASIIAG ALWSAFGPGA TFTAGAAFAL LAACGLIAYG VKPQAAK
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