Gene Dole_0268 details

Gene Information

• Locus tag: Dole_0268
• ID: 5693086
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 306709
• End bp: 308604
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 641262848
• Product: PpiC-type peptidyl-prolyl cis-trans isomerase
• Protein accession: YP_001528155
• Protein GI: 158520285
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0760] Parvulin-like peptidyl-prolyl isomerase

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000044
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTCAAT TCATGCGACA AAAAGCCTCA TCCATTATCA TCAAAGGGGT TTTAAGCCTG 
GTCATTCTGG CCTTTATTTT TCTGGGCATC GGCAATTTCC GGGAGCAGCA GGAGGTGACG 
GCGGCCACGG TCAACGAGGA GATTGTTACC GGCCGGGAGT TCCAATACAC CTACCAGCGG 
CTTCTGGATA CCTACCGCCA GCAGTTCGGC GGTGCCTTAA ACGACGACCT GCTCAAGATG 
CTCAACCTCA AGGAGCAGGC CATGAACCAG CTGATCTCGG AAAAGATCAT TCTGCAGCAG 
GCGGACAAAC TGGGCCTGAA CGTGTCGGAC AGCGAGCTGG CCGCAACCAT CAGCAGCATT 
CCCGCCTTTC AGAACAACGG CCGGTTTGAC AAGACCCGGT ATAACCGGCT GCTGCAGAGC 
AACCGCATGA CCGCCGCCGC CTTTGAGCAG AGCCAGAAAC AGGGCCTTTT GGTCGACAAG 
TTGCGCACCC TGATCACCGA CAGCGTTCTG GTGTCTGACA ACGAGGCCCG GCAGTGGTTT 
GACTGGGAAA ACGCCCGGGT GAAGATCACG GCCGCCGTGT TTGCGGCAGA GGGCCGTACC 
GACGTTGATC CCGCCGAAGC GGCGGTGGCC GCCTATTATG AGGAACACAA GGATCAATAC 
AAAACACCGG AAAAACGGAA AATCACCTAT GTGCGCGTGG CGCCCGCCCG CTACCTGTCC 
GAGGTAAAGG TGACCGAAGA AGAGATCGCC GATTTTTACC AGGCCAACCA GGATTTCTAC 
TGGAACGAAG AGACCGTGGA GGCCCGGCAT ATCCTGATTT CCCTGGAACA GGACGCGGAC 
GAGGCCCGGG TGGAGGAAGC CCGGCAGAAA GCCGCTGATA TTTACGTTAT GGTGACGGAC 
GGGGGCAAGG ACTTTGCTGA AACCGCCAGG CAGTATTCAG AGGGTCCCAG CGCCGGCGAG 
GGCGGCTACC TGGGCGCCTT TACCCGGGAA GACATGGTGG CGCCTTTTTC GGAAAAGGCC 
TTTTCCATGG CGCCGGGAGA GATCAGCGAG CCGGTGAGAA GCCAGTTCGG CTGGCACATC 
ATCAAGGTGG AAAAGGTCAA CGCGGCATTC ACCACGCCCC TGGACGAGGT CCGGGCGGAC 
ATTGAAAAGC AGCTGCTGGA CCAGAAGGCC GGAGAGTACG CCTATGAGGA GGCCCTGACC 
CTGTTTGACA TGGCCCTGGA CACCGACAGC GTTGAACAGG CCGCCGCCTC CCGGAACCTG 
ACGGCCGTCA CTACCGACGC CATTACGCAG AACGATACCC TGGCCGATGT TGAAGCCGGC 
CGCACCATGG TACGCCAGGC CTTTGACTTT GTTGAAAAAG AGATCAGCGA TGTGATTACC 
GAAGGCAATA CGCATTTTCT TTTTCAGGTG ACGGAAGTGA TGCCGGCCGC GGTGCCCCCG 
CTGGAGAACG TTCAGGCCCG CGTGATAGAA GATCTGCGGG AACAGATGCG GAAAGAGGCG 
GCCCAGGCCG AGGCCGAAAG CGTGCTTGAA AAGGTAAAGG CGGGCCAGCC CCTGGAGGCG 
GCCTGTGCCG GCACGCAGGC CGAGATCGTG GCCACCGGCT TTTTCGGCCG AACCGGCGCT 
GTTCCCGATA TCGGCAACGA GCCGGCCCTG TCCAGAGCCG CTTTTGACCT GACCAAAAAT 
CAGCCGGTTG CCCCGAATGT GGTGGAGGGG AGAACCGGTT ATTACGTTGT GGTGTTAAAC 
GACCAAAAGG CACCCGAGGC CTCGGAATTC GAAGAGAAGC GGGACGCTGT TGTCAAGCGG 
CTGACCGCGC AGAAGAAAAA CGAGGTGTTC ATGTCCTGGC TGAAGACCAT GCGCCAGGAA 
AGCGACATCA CCATTGACGA GGCGTTCCTG AGGTAA 

 

Protein sequence

MLQFMRQKAS SIIIKGVLSL VILAFIFLGI GNFREQQEVT AATVNEEIVT GREFQYTYQR 
LLDTYRQQFG GALNDDLLKM LNLKEQAMNQ LISEKIILQQ ADKLGLNVSD SELAATISSI 
PAFQNNGRFD KTRYNRLLQS NRMTAAAFEQ SQKQGLLVDK LRTLITDSVL VSDNEARQWF 
DWENARVKIT AAVFAAEGRT DVDPAEAAVA AYYEEHKDQY KTPEKRKITY VRVAPARYLS 
EVKVTEEEIA DFYQANQDFY WNEETVEARH ILISLEQDAD EARVEEARQK AADIYVMVTD 
GGKDFAETAR QYSEGPSAGE GGYLGAFTRE DMVAPFSEKA FSMAPGEISE PVRSQFGWHI 
IKVEKVNAAF TTPLDEVRAD IEKQLLDQKA GEYAYEEALT LFDMALDTDS VEQAAASRNL 
TAVTTDAITQ NDTLADVEAG RTMVRQAFDF VEKEISDVIT EGNTHFLFQV TEVMPAAVPP 
LENVQARVIE DLREQMRKEA AQAEAESVLE KVKAGQPLEA ACAGTQAEIV ATGFFGRTGA 
VPDIGNEPAL SRAAFDLTKN QPVAPNVVEG RTGYYVVVLN DQKAPEASEF EEKRDAVVKR 
LTAQKKNEVF MSWLKTMRQE SDITIDEAFL R