Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0153 |
Symbol | |
ID | 5692968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 166953 |
End bp | 168641 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641262730 |
Product | hypothetical protein |
Protein accession | YP_001528040 |
Protein GI | 158520170 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000747237 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGAAAA CAATCAAAAC CCTGCTGGCG CCCAGGATAC TGTCGTTTAA AAACCGGATT TTTCTGTCCG GAAAGACCCG GGTGGCGGTG TTCGGCGCCG TGGGACTGGT GCTGTGGGCC GGGGTCTTTG CCGGCGCCTT CCGGGTGCTG ACCTATTTTG AATCCATCGA AGACCTGGGC GATATTCTGG CAAACAAACT GCTTTCCATG CTGTTTGTGG TCATGCTCTC CCTGCTTGTT TTCAGCAGTA TTATTACCAC CCTGTCCAAG CTCTATCTCT CCCGGGACCT GGACCTGGTG CACTCCCTGC CGGTGGCGGC CCGGCACCTG TTTTTCGCCC GGTGGATCGA AAGCACGGCG GACAGTTCCT GGATGGTGGT GCTTTTTGTG CTGCCGGTGT TTCTGGCCCA CGGCATTGTT TACAGCGCCG GTCCGCTTTT TTACCTGGCC GTGGTTTTGT TTCTGCTGAT GCTGTGCGTC ACGTCCTCGG CCATCAGTGC CACCGGCATT GCCTTTGTGG TCAACCTGAT CTCCGCCTCC CGGTTGAAAA CCATTTTCGT GTTTCTGGGG CTTTTGCTGT TTGTTCTGCT GTACGTCGCC TTTCGCATGA TGCGGCCCGA GCGGCTGGTG GATCCGGAGA TGTTTGCCAC CACCCTGGTG TATCTGAGGT CCCTTAACGC CCCGGCCCCG GCCTGGCTGC CCAGCACCTG GGCCTATGAC GGCGTGACCG CCGCCCTGTC CGGCAACACC GGCGCCCTGT TGTTCAACCT GTTGCTGAGC GGCGCCTGTG CCGGAAGCCT GGTGGTGTTC ATGCTGATTG TTGCCGAGGC AGTCTATTTT TCGGGATTTT CCAGGTCATC CTCCGGATGG GCCGACCCGG TCACACCGGA AGATACGGCC CGCCGTATCT ATCGGGACCG GTCATGGCCG GCCTTTCTCC CGGCCCCTGC GCGGGCCTTT TTCGTAAAGG AGGTCCGTAC CTTTGTCCGG GACCAGTCCC AGTGGTCCCA GCTGTTTCTG ATCGCTGCCC TGGTGGTGAT CTATATTTAC AATTTCAAGG TGCTGCCCCT GGAAACATCA CCCATGCCCG TGGTGTGGGT GCAGAACATT TTTGCCTTTC TGAACATGGG GCTGGCCGCC TTTGTGCTGA CCGCGGTGAC GGCCCGGTTT GCTTTCCCCG CAGTGAGCAT GGAAAAATCG GCTTTCTGGA TCGTCCAGTG CGCGCCGGTC TCCATTCGGA CCTTTCTGCG AATCAAGTTT TTCGTCTACC TGGTGCCGCT GTTTGTGCTG ACCATGACCC TGATCGTTGT CACCAACCTT CTGCTGAACG TGGCCGGTGA GATGATGGTG CTCTCCCTTG TCACGGTATC GCTGATGGTG CCGGCTATCG TGGCCATGGG CGTGGGTATC GGCGCGGTGT ATCCCGATTT TTCTTCGGAA AATCCGGCCC AGGCGGTGAG CAGTTTCGGC GGGTTTGTGT TCATGGCAAC CAGCGCGCTT TATGTGATCG CGGTGATCGT GCTGGAGGCC GGTCCGGCCA GCCGGCTGGT TTTTGCCGGC CTGCGGGGCC GGTCCCTGAG CCCGGAGTCG TGGGCCTGGA TCATCGGCTC TTTTACGACC GTGGTCGCCC TGTCCGTTCT TGCCGTGGTG GTTCCCCTGA GATTGGGAGA AAGGCGGCTG CAGGGCTAA
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Protein sequence | MLKTIKTLLA PRILSFKNRI FLSGKTRVAV FGAVGLVLWA GVFAGAFRVL TYFESIEDLG DILANKLLSM LFVVMLSLLV FSSIITTLSK LYLSRDLDLV HSLPVAARHL FFARWIESTA DSSWMVVLFV LPVFLAHGIV YSAGPLFYLA VVLFLLMLCV TSSAISATGI AFVVNLISAS RLKTIFVFLG LLLFVLLYVA FRMMRPERLV DPEMFATTLV YLRSLNAPAP AWLPSTWAYD GVTAALSGNT GALLFNLLLS GACAGSLVVF MLIVAEAVYF SGFSRSSSGW ADPVTPEDTA RRIYRDRSWP AFLPAPARAF FVKEVRTFVR DQSQWSQLFL IAALVVIYIY NFKVLPLETS PMPVVWVQNI FAFLNMGLAA FVLTAVTARF AFPAVSMEKS AFWIVQCAPV SIRTFLRIKF FVYLVPLFVL TMTLIVVTNL LLNVAGEMMV LSLVTVSLMV PAIVAMGVGI GAVYPDFSSE NPAQAVSSFG GFVFMATSAL YVIAVIVLEA GPASRLVFAG LRGRSLSPES WAWIIGSFTT VVALSVLAVV VPLRLGERRL QG
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