| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0151 |
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| Symbol | gatA |
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| ID | 5692966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 165014 |
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| End bp | 166474 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641262728 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_001528038 |
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| Protein GI | 158520168 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00414509 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCTT ACGCATTAAC CATACATGAG GCCCGGCAAC TGCTGGACAA AAAAGAGATC
TCTTCCGTTG AGCTGACCCG GTCGGTGTTT GACCGCATCG AACGGGTGGA GCCAAAAGTG
GGGGCCTACA TTACCCTGGC CCGGGAGTCT GCCCTGTCCG CTGCCGCTGC CGCGGACACG
CGCCTTCAGA GCGGCGGCAT CGCGCCCCTT ACCGGCATTC CGCTTGCCGT CAAGGACCTT
ATCTGCACCA CCGGTCTTCG CACCACCTGC GCCTCCCGCA TGCTGGAAAC CTTTATGCCC
CCCTATGACG CCACGGTGAT TGAAAAGCTT AAAACTCAGG GGGCCGTGAT CACGGGCAAG
GTGAACATGG ACGAGTTTGC CATGGGATCA TCCACCGAGC ATTCGGCCCT GGGGTCCACC
AAAAACCCCT GGAACCTGGC CTGCATTCCC GGCGGCTCTT CCGGCGGGTC GGCCGCGTCC
GTGGCCGCGG ACATGTGCCT TGGCTCTCTG GGGTCGGACA CGGGCGGCTC CATCCGCCAG
CCCGCCTCCC ACTGCGGCGT GGTGGGCATC AAACCCACCT ACGGCCGGGT CTCCCGGTAC
GGCCTGGTGG CCTTTGCCTC CTCTCTGGAC CAGATCGGGG TCCTGGCCAA GGATGTGACC
GACAGCGCCC TGCTGCTTTC GGCCATCTCC GGCCACGATC CCAGCGACTC CACCTCGGTG
CCCAGGGAGG TACCGGACTA CGCGGCCTCC TGCGAAAAAG GGCTTTCCGG CCTCACTATC
GGCGTGTGCC GGGAGTACAT CAATGCCGAG GGCCTGGATC CCGAGGTGGC CGATACCGTG
AACCGGTCCA TCGAACACAT GAAAGCACAG GGCGCCGCCT GCGTGGAGGT CTCCCTGCCC
CATGCTCAAT ACGCGGTGGC CGCCTATTAT GTCATTGCCC CGGCCGAGGC CAGCTCCAAC
CTGGCCCGGT ACGACGGGGT CAAGTACGGG TTCCGCGATC CTGAAGCCGA CAGCCTGCTG
GAGATGTACG CCCGCACCCG GTCACGGGGG TTTGGCAAGG AGGTCCAGCG ACGGATCATT
ATCGGCACCT ACTGTCTCTC CTCCGGTTAT TACGACGCCT ACTATCGAAA GGCCTCCCAG
GTGCGATCCC TGATCGCCGA TGATTTTAAA AAAGCGTTTG AAACCTGCGA CGTGATCGTG
TCGCCGGTGG CCCCCACCCC GGCCTTTGAA CTGGGCGCCA AGACCGAAGA CCCGCTGACC
ATGTACCTGT CCGACATCTT TACCCTTTCG GCCAACCTCG CCGGCGTGCC CGGCATGTCG
GTGCCCGGCG GGTTTTCCAG CACCGGCCTG CCCATCGGCG TACAGCTCAT CGCCGGCCAT
TTTAACGAAC CGGCCCTGGT GCGGTGCGCC TGGAACCTGG AGCAGGCCGT AAACATCGCG
AACAAAAAGC CGGCCTTATA A
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| Protein sequence | MEPYALTIHE ARQLLDKKEI SSVELTRSVF DRIERVEPKV GAYITLARES ALSAAAAADT
RLQSGGIAPL TGIPLAVKDL ICTTGLRTTC ASRMLETFMP PYDATVIEKL KTQGAVITGK
VNMDEFAMGS STEHSALGST KNPWNLACIP GGSSGGSAAS VAADMCLGSL GSDTGGSIRQ
PASHCGVVGI KPTYGRVSRY GLVAFASSLD QIGVLAKDVT DSALLLSAIS GHDPSDSTSV
PREVPDYAAS CEKGLSGLTI GVCREYINAE GLDPEVADTV NRSIEHMKAQ GAACVEVSLP
HAQYAVAAYY VIAPAEASSN LARYDGVKYG FRDPEADSLL EMYARTRSRG FGKEVQRRII
IGTYCLSSGY YDAYYRKASQ VRSLIADDFK KAFETCDVIV SPVAPTPAFE LGAKTEDPLT
MYLSDIFTLS ANLAGVPGMS VPGGFSSTGL PIGVQLIAGH FNEPALVRCA WNLEQAVNIA
NKKPAL
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