Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0094 |
Symbol | |
ID | 5692909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 103072 |
End bp | 104205 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641262671 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_001527981 |
Protein GI | 158520111 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000475987 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTT CCGTTGAAAA AAAAGACATC ATTGAAATGC TGGCCAATGT CCAGGGGATA GCGGGGAAAA GGTCCAGCCT TGCCATCACT GAAAACATTT TAATTAAAAC CGGAAAAGAG GGGATATCCG TATCCGCAAC GGATATAGAG ACCGGTTTTG AAGGTATCTA TCCGGCCACG ATCGAAAACG AGGGCACCAT TGCCATTAAC GCGCGGCAGT TTTATGAGAT TGTAAAAAAA ATAGACAGTA ATATTATATA TTTAAGAGAA GAAAAAAAGC AGTGGATTCA GATCAGCGAC ACAGAGGACG GATCCCGTCT TAAATATCAG ATCATGGGTG GAGAGACTGA AAGTTTTCCT CAACTTCCGG TCATCGCCGA TGTTTCCTAT ATAGATGTAA ATTCTGCTGA TTTTAAAAAT ATGATTTTGT GGGCAACAGT GATCACCTCC AGTGGAACTG AAAAAAGGGC CCATGTGATC GGCGCCAATC TGGAATATAT TAAAGACGGA AAAATAAAAA AAATAAGAAT GGTTTCAACT GACGGAAAAA GGCTGACAAA AACAGAGTAT TCCTACAAAA AAGGAGAACC CGACACGCCG GAGACCAGCA CGATTCTTCC CAAAAAAGCC TTAAATGAAC TGTTTAAATT TTTAAAAGAT GAGGGAACTA TTCAGATAGG CACCCGGGAT AATTATTTTA TAGTTAAAAA TAATAATGAA ATCATATATA TAAATCTTTT AAGCGGTGAA TACCCGAACC TTGAAACGCT TTTTTCTGAC GAAAAGGGCA GAACCGAAAT AAAAATAAAC CGAAAAAAAT TAAAAGACAT GCTGGAACGG ATGTCCATAT TAACGACTGA TAATTATAAG GGCGTTATTT TTACATTTGA AAAAAATATT CTCACCATCA ATGCCCAGAA TCCGGATCGG GGAGAATCTT ATGAATGGAT GGATATTCAG TATGATAAAA AACAGATTAA ATCCATGTTC AACCCGGATT ATTTTATTGA TGCGGTCAAT CTGATCGAAG ATGACGAGGT CTGTCTGAAA TTAAAAGAAG ATCAGGCCCC CTGTATTGTC TGTGGCGGCA AACATCCGGA AAATATTAAC ATCATTATGC CGATGAAAAT TTAA
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Protein sequence | MKLSVEKKDI IEMLANVQGI AGKRSSLAIT ENILIKTGKE GISVSATDIE TGFEGIYPAT IENEGTIAIN ARQFYEIVKK IDSNIIYLRE EKKQWIQISD TEDGSRLKYQ IMGGETESFP QLPVIADVSY IDVNSADFKN MILWATVITS SGTEKRAHVI GANLEYIKDG KIKKIRMVST DGKRLTKTEY SYKKGEPDTP ETSTILPKKA LNELFKFLKD EGTIQIGTRD NYFIVKNNNE IIYINLLSGE YPNLETLFSD EKGRTEIKIN RKKLKDMLER MSILTTDNYK GVIFTFEKNI LTINAQNPDR GESYEWMDIQ YDKKQIKSMF NPDYFIDAVN LIEDDEVCLK LKEDQAPCIV CGGKHPENIN IIMPMKI
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