| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0058 |
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| Symbol | |
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| ID | 5692872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 65215 |
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| End bp | 65940 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641262634 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001527945 |
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| Protein GI | 158520075 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCA TCCCGACCAG AGGCCAAATA CGCCTGCAGA AATTTCTTTC CGGCGCCGGC
GTCTGTTCCC GGCGCCGGGC CGAGGTTTAC ATTGCCGAAG GCCGTGTTGC GGTCAACGGG
CAGGTGGTCA CGGAACTGGG CACAAAGGTG GACCCGGAAT CCGATGACGT GATGTTTGAC
GGCCACCGGG TCACCCTGGC CGAAAGCCAT GTCTATATCG CTTTAAACAA GCCGCCGGGG
TACGTGACCA GCTGTTTGCA GAAGCAGGAG ACAACCGTGA TGGAGCTGGT GGCCGTTGAT
CAGCGGGTCT TTCCGGTGGG CCGGCTGGAC AAGCCATCCT GCGGGCTGCT TTTGATGACC
AGTGACGGCG GCCTGCACCA GCGGTTGAGC CACCCCTCCT TTGATCACGA AAAGGAGTAT
GACGTGGCCT GTGACCGGCC GGTGAGCGAC GCCGACCTGG ACGCCATGCG AAGGGGCATG
GTGATCACCG GAAGAAAGAC CCGGCCCGCA AAAGTAAAGC GGCTGTCAGA CCGGCGGTTT
TTAATTATCC TGCAGGAGGG ACGCAACCGG CAGATCCGGC GCATGGCCGA GATGCTGGGC
AACCGGGTGG TGCTGCTGCG CCGGATTCGT ATTGCCCACA TTCACCTCGG GGACCTGGCC
GAGGGCCGGT GGCGCTATTT GACGGAAGAA GAGAAAAAAG CACTGCTGCA CCAGGAGGAG
ACGTGA
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| Protein sequence | MTTIPTRGQI RLQKFLSGAG VCSRRRAEVY IAEGRVAVNG QVVTELGTKV DPESDDVMFD
GHRVTLAESH VYIALNKPPG YVTSCLQKQE TTVMELVAVD QRVFPVGRLD KPSCGLLLMT
SDGGLHQRLS HPSFDHEKEY DVACDRPVSD ADLDAMRRGM VITGRKTRPA KVKRLSDRRF
LIILQEGRNR QIRRMAEMLG NRVVLLRRIR IAHIHLGDLA EGRWRYLTEE EKKALLHQEE
T
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