Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0032 |
Symbol | |
ID | 5692846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 37152 |
End bp | 37847 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641262608 |
Product | hypothetical protein |
Protein accession | YP_001527919 |
Protein GI | 158520049 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.164045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATGGC GCCCGCGCCA GAAAAGTGCA AGCATGTCAC TGATTGAACT GTCCAACTAC ACGGTGGCCC GAAACGAGCT GCGCCTGAAA AACATTTCGC TGGCAATCTC GCCCGGCCAG TGCTGGCTGG TGGCGTCGGA TCTCCGGGAA AGCGCGGGCC TGCTTTTTGC CGCCCTGGCC ACGCTTGTCA AGCCGGAGAC AGGGACTTTT CGCTTCAAGA ACGCGCTTCT GGATTTTTCC ACCTACCGGC AACTGCTGTC CTGTAAAAGA GAAATCGGTT ACGTTTCCCC GGCCAACGTG TTGCTGAGCA ACCGGACCAT CCTGGAAAAC CTTCTGCTTT CAGATTTTTA TGACAAGAAC ACGCTGTCGG TGACCCTGGA CAAGAAAACC GATGAGATGT GCCTGCTGTT TCACATTCGC AACCGGCTGG GCCAGAAGGT GACCGAGGCG GACCGCTGGG ACCTGCGGCT GGCCATGGCC GTCCGGGAAC TGGCCAAGGA CCCCGCCGTC CTGCTGGTGG AGTGGCCGGA GGAGGTGGTG CCGCCGGACC GGCAGTGGAT GTTTGTCAAC CTGCTGCAAC AAGCCCTTGT GTCCGGCACC CCTCTGGTGA TATTTTCAAG GGACCGGTCT TTCTGCGCAA ACTTTTCGGC GTCCGGAAAG ATCGTCATAA AGGGAGAAAG GGTAACCGTC TCGTAA
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Protein sequence | MAWRPRQKSA SMSLIELSNY TVARNELRLK NISLAISPGQ CWLVASDLRE SAGLLFAALA TLVKPETGTF RFKNALLDFS TYRQLLSCKR EIGYVSPANV LLSNRTILEN LLLSDFYDKN TLSVTLDKKT DEMCLLFHIR NRLGQKVTEA DRWDLRLAMA VRELAKDPAV LLVEWPEEVV PPDRQWMFVN LLQQALVSGT PLVIFSRDRS FCANFSASGK IVIKGERVTV S
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