Gene Dole_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0030 
Symbol 
ID5692844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp30896 
End bp36115 
Gene Length5220 bp 
Protein Length1739 aa 
Translation table11 
GC content62% 
IMG OID641262606 
ProductATPase domain-containing protein 
Protein accessionYP_001527917 
Protein GI158520047 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase
[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCATC CGCTCGGCGA CATCGCACGA CAGGCGCTTG CCCACCGTTA TGATCGGCTG 
GTTGAGATGG ACGCCACCGG CACGTCGACC ACGCTTTCGG CCGTAGACCG GGACACCGGC
AGGGCGGTGG TGGCCCGGCT GCTGGGTGTC GAGACCCGTT TTCCCGCCGC CGGAACGCTT
CTCGACCATG TGGCGCGGCT GGCCTCCCTT TCCTCTGACT ACCTGCTTGA GATATATGAA
TACCGGGAGG TGCCCGCGGA CAGCCCTTCC GGCATACTGG TCATTCATGA GGCGTTTACC
GGCATGCCCC TGGGCGACCT GCTGCCGTCA TTTCACCGGA TGCTTTCCGA AGATGCCCGG
CCCGGCCATG CCTTTTGTGT CCTGGCGGCC CAGATGGCGA CGGCGCTTCG CGACCTTCAC
GCGGCCGGCC TGCTTTACCG GGGTATCACG CCCCACAGTT TTCTGTTTAA TCCCGCCACC
CGCCGGTTCA AGCTCGACGG CCTTGCCTGG GATGACGCGT GGCTGCCCGA ACAGGGCGGT
TTTTCGGCCG GCGTCGCCGC ATCGGCGCTC TCCTGTCTTG CGCCGGAGCA GGCCGGCCGC
ATGGACCATG TCGTGGACTT TCGCGCCAAC CTCTACTCCC TGGGGGTGCT GTTTTATGAA
ATGATGACGG GAAAACACCC GTTCCCCGCC GGGGATGCCG CCGGCGTGTT GTACGGGCAC
ACGGCCCGGA CCCCGGCCCT GCCGTCGGAC CTCAATCCCG CCATGGACAC GGCCCTTTCC
CGCATGGTGC TCAAGCTGCT GGCCAAGCAT CCCGATGATC GCTACCAGAG CGCCGCCGGC
CTGCTGTTTG ACCTGGCCGA CCTGACCGGC CGGTTTGACG CCGCCCTTTC CGTTGGGGAG
TTCATGCCGG GCCGAAAGGA TGTTTCCCCG GTATTTGCCC TTCCCGACCG GCTCTACGGT
CGCGAGGAGG CGCTTTCGTT TTTGAAAAAG CGGTTTGACC GGGTCCGGGC CGGCGACACC
GGCGTGGTGA TGGTGACCGG GGGCACCGGC GTGGGGAAAA CCGAGGTGAT TCGCCACCTG
AGCCGTTATG TCCGGGAGTC CGGCGGTATT TTTCTCACCG GCAAGTTTGA TCCGAACCAG
CAGAACGTTC CCTTAAGCGC GTCCAAAACC GCTATTGCCA GCATTGCCCG GTGGCTGTTA
AGCCGGCCCC CGGACCAGAT TCGGGCATGG CGGGAAAAAA TACTGTCGGC GGTCTGGCCC
AGCGGCCAGG TCCTGGTGGA CATGATTCCG GAAATGGAAC TGATCATCGG CAAGCAGCCG
CCCCTGGGAG AGCTTCCGCC CATGGAGGCC AATATGCGGA TGGCCCTGGT CATGGAGAAG
TTCGGGACCC TGTTTCTGGC CAGGGAACAC CCGGTGGTTT TTTTTCTCGA CGACCTGCAG
TGGGCCGACC GGGGAACCCT GGAACACGGT GTCGCCTTCA TGCTGATCCG GCAGCGGCAC
TACTGCATGG TGCTGGGTAC CTGCCGGGAC AGCGAGGTGG ACGACACCCA CCCGCTCTCC
CGGTTCCTGG AAAAGCTGGA ACGCACCAGT GTCCCGGTTG AAAAGCTGTC GCTGCGGCCC
CTGGATATCG ACCAGACCAC GGCCATGATG GCGGATACGC TTTCCCAGGC CAGGACGGCC
GTTCTCCCGC TGGCCCGCAT CGTTTTTGAA AAGACCGGGG GCAACCCCTT TTTCATCCGG
CAGTTCCTGG GGTCTCTGCA TGCCAACGGC CTGATCCACT ATGACACGGG CCGGGGCTGC
TGGGCATGGA ACGTGGAACG CATTGCCGCC GCCGACATCA CCGACAACGT GGCCCGGCTG
CTCTCCACGA CCATCGACAA GCTGCCGGCC CCGACCCTGT CGGTGCTTCA GGCCGCGGCC
TGTGCCGGGA ACCGGATCGA CCCGGAACTG CTTGTCCTGG TCATCGGCCG GGACCGGGCC
GACATTTGCG CCCATGTTCA AACGGCCCTG GAGGCCGGAC TGGTCCACCC CGTTACCGAC
CCTTCCGCAA CGGCCCCGGC CGTTGACACC AGCACCGGTT TAACGTGGGA GTTCGCCCAT
GACCACATTC TTCAGGCGGT TTACCAGACC CTTCCTGAAA CACAGGCACG GGAGATTCAC
TGGACTGTAG GAAAGGCGCT GCTGGAGAAG GCATCGGAAG GGGCTCCGGG AGAAAGAATT
TTTGATATTG TTCACCAGCT TCGGCTCGGC ATGCCGCTTT CCCTTTCCTC TCCCGAAGCA
ACCGAACTGG CCCGCCTTAA CCTGGAGGCC GGGCGCGTGG CCATGGAGAC CATCTCTTTT
GAAGGGGCGG CCGACTACCT GCGCCACGCC TGTAACCTGC TGCCGGATAC CGCGTGGGAG
ACGCATTATG ACCTGGCGGC CGGAATTTAC GGCGCCCTGG CCAGGTGCGA GTTTGCCCTC
GGCGCTTTTG TCGAATCAGA GCGATTGTTC GGCCTGCTGC TGCAAAAGGC CCCCTCCCTG
GTGACCCGGG CCCGGGCATA CAACGCCATG GTGGAACTTC ACACCGCCGC CGGCAACATT
GACAAGGCTT TGATGCTGGG CCGCCGGGCA CTGGAGACCC TCGGCATTCA CCTGCCCCGC
CGGCCGGGCC GGGCCCGGGT GCTGCTGCTG CTGGTTCGTC TGCGCCTGAT ATGGGGGGTT
CGCAGGGTTT CCGCCATTCT GGACGCAGCG GAAAACCGGG ATGAAACACT GGACATCACC
CTGACCCTGC TGACCAACAT CGGGCTGCCC ACTTTTTATG TCAACCCCCT GCTCTGCCTC
TGGATCAACG CCACCGGCAT CCTGCTGGGC ATTCGGAACC CCAAAGAGGG GTTTCCCCTT
CAGCACGCTT CCTTTGGCCT GATCACTCTG GGCGCTTTTC TGGGGTCCAT CTTCGGGTTT
ATCGGCATGG GACGCCACTA CGCCAAGACC GGTATGCGGC TCCTGGAGCG CCAGGCGCCG
GGGCAGTACC AGGCCATCGC CTATTTTGTG TCCGCTTTTT TCAACCGGCA CTGGTATCAG
CCGGCGAGAA AAAGCATCGA CTCCTTCAAG CGGGCCTATC GTCATGCCCT GAAAACCGGG
GACATCAGTT ATGCCGGCCA CAGCATCAAC TCCATGTTTA TGGTCCGTTT TTTTCTGGGG
GACAACCTGG ACGCGGTTTA CGCCTATCAC CAGCGGCACG AGGCGTTTAT TCAGAAGGCC
CGCTCTCCCT TTGCCGTGGC CCATTATAAA CTCCTTCGGC AGCTTTATCG AAGCCTTAAA
GGGCAGGCCC TTTCCCCAGC CGGCCTGGAC ACAAAAGATT ATGACACGGC AGCTGAGTTC
GCGGCGGTCG TAGACACGGG CAACCTGCTG CTGCGATTCT TTTTTCTGTT GTCTCAGCTC
AAGCTCTATG TTTTTCACCG CCAGTGGGAG AATGGCGCGT CCCTGGTGGA ACGCATTCAG
GCGATGAACT ACCTGCCCGT GGGGACACTG GTGGTGACCG AGTACTGTTT TTTCGCCTTT
CTGAGCATTA CGAATCTGAT TGTTGCCGGC ACGCCGCCGC AACAGGCCCG GCGATACAGC
CGTAGGGCGG CCCGTTTTAT TCGACGGATG CGGCAGTGGT ACCGGCTGCA GCCGGACAAC
TTCGAACCCA TGCTGCGCCT GATGGAGGCG GAAAAGGCCC GTGTCCAGGG ACGGCCGGTA
CAGGCCCAGG AGCGCTATCG ACAGGCCGTG GCCGCGGCCC GGGACGGCGG GTTTACGCAT
CTGGCGGCAC TGGGGTGTGA ATCGGCCGGA AATTTTTTCG CGGCCCAGGG CGACACCGTG
GCGGCCCGGG CATATTTGGC CGAAGCCAGA AAGGCGTATC TAGACTGGGG GGCCACAGCA
AAGGCCGCGG ACCTGGAAAA ACAGCATGCC GGCCTTTTTG CCGCCATTCC CGGCCACACG
GCGGTGTCCA TCTCCCCCCT GGAGCGCGCG GACCATGGGG CCGTGGTGGC GGCCCTGCAG
GCGGTTTCAC AGGAGATCGT GGTGCGCCGG TTGCTGACCC GGCTGATGGA AATCACCATG
GCGGCCACCG GCGCCAGCCG GGCCGCTTTC ATTTCCAACC GGCAGGGCCG GCTCTTTGTT
GAGGTGGAGC GGTGGGGAAA CGAAACGGAC CAGACCCTGC TGAAGAGCGA GCCCCTGCTG
GAGCAGCCCA CCTCACTGAT GGCGGCGGTG GTCTATTATG TCAAGCGGAC CCGGGAACTG
GTGGTGATGA ACGATGTAAA AAAAGAGTCG TCGCTGTTTC AGAAAAACAG TGATGACGCC
GGCACCCCCC GGGCACTGGT CTGCATGCCC ATGGCCCGGA ATAAAAGGCT GGTGGGCATT
CTGTACCTGG AAAACGCTCT GACCGGGGGC GTGTTCACCG AAGACCGGAT CGGCCTGCTC
ACGATGATTG CCTCCCAGGC GGCCGTCTCT TTTGAAAATG CCACCCTTTA CGAGCATGTC
ATGAAAAACG AGCAGGACCT CAAGCGGTTG TCTGAAAAGT TGCGAAGCCT CTATTCGGAA
CTGCTGCTGA CCGAGGAACG GGAACGCCGC CGCATCGCCA CCGAGCTTCA TGACCGCATC
GGACATGCTC TGGCCGGCGC GAAAATCGGA CTTGAAACCC TTTGTAAAGG TTCGGCAAAA
GAGCACGAAG CCCGGCTTCG GGATGTTCTG GCGGTTCTGG ACCAGTCCAT TGCCGATACC
CGCACCCTGA CCTTTGAGCT GAGCCCGCCG ATTCTCTACC ACCTCGGCCT GGGCCCGGCC
CTGGACTGGC TATGCGAAGA GACCCAGAAA AAACATGGCC TGACCGTCTC CTTTGCCGAT
ACCGGGCAGG AGGGGGGCCT TGATCAGAAA ACGGAAATCC TCTGTTTTCA GATAGTGCGG
GAACTGCTGT TTAACGCGGT AAAACACTCC CAGGCCGGTC ATGTGGAAGT GCGCCTGTAC
CGTAACGGCG CACGGATGGG CCTGACCATT CAGGATGACG GCGTCGGCTT TGACGGGTCC
CGGCAATCGG CCGGTAGCGG GTTCGGGTTG TTCAGCATTC ACGAGCGGTT GCGCCTGGTG
GGCGGAGAGA TGAACATTGA TACCGGAAAA AACCGGGGCA CCACGATTGA TATTACGGTT
CCCCTGACAG GCGAAAATCA AAACCAGGGA GAGGTGAATG ATCAAGGTTC TGGTGGCTGA
 
Protein sequence
MAHPLGDIAR QALAHRYDRL VEMDATGTST TLSAVDRDTG RAVVARLLGV ETRFPAAGTL 
LDHVARLASL SSDYLLEIYE YREVPADSPS GILVIHEAFT GMPLGDLLPS FHRMLSEDAR
PGHAFCVLAA QMATALRDLH AAGLLYRGIT PHSFLFNPAT RRFKLDGLAW DDAWLPEQGG
FSAGVAASAL SCLAPEQAGR MDHVVDFRAN LYSLGVLFYE MMTGKHPFPA GDAAGVLYGH
TARTPALPSD LNPAMDTALS RMVLKLLAKH PDDRYQSAAG LLFDLADLTG RFDAALSVGE
FMPGRKDVSP VFALPDRLYG REEALSFLKK RFDRVRAGDT GVVMVTGGTG VGKTEVIRHL
SRYVRESGGI FLTGKFDPNQ QNVPLSASKT AIASIARWLL SRPPDQIRAW REKILSAVWP
SGQVLVDMIP EMELIIGKQP PLGELPPMEA NMRMALVMEK FGTLFLAREH PVVFFLDDLQ
WADRGTLEHG VAFMLIRQRH YCMVLGTCRD SEVDDTHPLS RFLEKLERTS VPVEKLSLRP
LDIDQTTAMM ADTLSQARTA VLPLARIVFE KTGGNPFFIR QFLGSLHANG LIHYDTGRGC
WAWNVERIAA ADITDNVARL LSTTIDKLPA PTLSVLQAAA CAGNRIDPEL LVLVIGRDRA
DICAHVQTAL EAGLVHPVTD PSATAPAVDT STGLTWEFAH DHILQAVYQT LPETQAREIH
WTVGKALLEK ASEGAPGERI FDIVHQLRLG MPLSLSSPEA TELARLNLEA GRVAMETISF
EGAADYLRHA CNLLPDTAWE THYDLAAGIY GALARCEFAL GAFVESERLF GLLLQKAPSL
VTRARAYNAM VELHTAAGNI DKALMLGRRA LETLGIHLPR RPGRARVLLL LVRLRLIWGV
RRVSAILDAA ENRDETLDIT LTLLTNIGLP TFYVNPLLCL WINATGILLG IRNPKEGFPL
QHASFGLITL GAFLGSIFGF IGMGRHYAKT GMRLLERQAP GQYQAIAYFV SAFFNRHWYQ
PARKSIDSFK RAYRHALKTG DISYAGHSIN SMFMVRFFLG DNLDAVYAYH QRHEAFIQKA
RSPFAVAHYK LLRQLYRSLK GQALSPAGLD TKDYDTAAEF AAVVDTGNLL LRFFFLLSQL
KLYVFHRQWE NGASLVERIQ AMNYLPVGTL VVTEYCFFAF LSITNLIVAG TPPQQARRYS
RRAARFIRRM RQWYRLQPDN FEPMLRLMEA EKARVQGRPV QAQERYRQAV AAARDGGFTH
LAALGCESAG NFFAAQGDTV AARAYLAEAR KAYLDWGATA KAADLEKQHA GLFAAIPGHT
AVSISPLERA DHGAVVAALQ AVSQEIVVRR LLTRLMEITM AATGASRAAF ISNRQGRLFV
EVERWGNETD QTLLKSEPLL EQPTSLMAAV VYYVKRTREL VVMNDVKKES SLFQKNSDDA
GTPRALVCMP MARNKRLVGI LYLENALTGG VFTEDRIGLL TMIASQAAVS FENATLYEHV
MKNEQDLKRL SEKLRSLYSE LLLTEERERR RIATELHDRI GHALAGAKIG LETLCKGSAK
EHEARLRDVL AVLDQSIADT RTLTFELSPP ILYHLGLGPA LDWLCEETQK KHGLTVSFAD
TGQEGGLDQK TEILCFQIVR ELLFNAVKHS QAGHVEVRLY RNGARMGLTI QDDGVGFDGS
RQSAGSGFGL FSIHERLRLV GGEMNIDTGK NRGTTIDITV PLTGENQNQG EVNDQGSGG