Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_928 |
Symbol | |
ID | 8657860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 859870 |
End bp | 860859 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | ABC-type oligopeptide transport system, ATPase component |
Protein accession | YP_003330375 |
Protein GI | 270308317 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.536054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGGAAAAG ATATAATCCT TGAAGTTACC AATCTGACTA AATATTTCCC TGTTACCGGC GGGCTTTTCG GCCGTAAAAA ACTGGCTGAG GTCAAAGCGG TAGATGGGGT AAGTTTTGCT ATTCACAAGG GGGAAACGCT GGGTTTGGTG GGGGAAAGCG GCAGCGGTAA AACTACTATC GGCAAAAACA TACTCCAGCT TCAGCGGCCT ACTTCTGGTG AAGTCTGGTT TAAAAATAAA GATTTGGCCA GTCTGACCAA CAAAGAGCTT CGTCCGTACC GTCAGAAGTT GCAGGTGGTA TTTCAAGACC CTTACGAATC GCTTGACCCG CGTTTTACTG CGGCAGATAT TATCGGCGAA CCGCTACGTT TACATAAAGT AAACAACAAA GAATATAATA AACGTATAGC GGAGCTTTTA AAGCTGGTAG GATTATCACC CTATATGGCC GAGCGTTATC CCCATGAATT CAGCGGCGGC CAGCGCCAGC GTCTTGGGGT GGCCAGAGCT TTGGCCTTGC AGCCGGAATT TATTGTGTGT GACGAGCCGC TTTCGGCATT AGATGTATCC ATTCAGGCTC AGATAATAAA TCTGTTGGAT GACCTGAAGA ATAAATTTGG TCTTTCGTAC CTGTTTATTT CGCATGACCT CTCAGTAGTT AGGCATATTT CAGATAGGGT AATGGTAATG TACCTGGGTA AACTTATGGA AGTAGCCGAT AGGGATGGTT TGTATGAAAA ACCACTTCAC CCGTATACTC AGGCACTTCT CTCGGCGGTG CCTATACCTG ACCCTGCGGT TGAGGCTGAA CGTAAAGTCA TTATACTCAA GGGTGAAGTA CCCAGCCCCC TGAATCCGCC CAGCGGTTGT GTATTTCATC CGCGCTGTTT TAAAGCCTTT GAAGATTGTC CTAAAATAGT GCCGGTAATG GGGGAGGTTT CACCCGGGCA CCATGTGGCT TGTCTGCTTT ATAAAGAATG CTGGCCTTAA
|
Protein sequence | MGKDIILEVT NLTKYFPVTG GLFGRKKLAE VKAVDGVSFA IHKGETLGLV GESGSGKTTI GKNILQLQRP TSGEVWFKNK DLASLTNKEL RPYRQKLQVV FQDPYESLDP RFTAADIIGE PLRLHKVNNK EYNKRIAELL KLVGLSPYMA ERYPHEFSGG QRQRLGVARA LALQPEFIVC DEPLSALDVS IQAQIINLLD DLKNKFGLSY LFISHDLSVV RHISDRVMVM YLGKLMEVAD RDGLYEKPLH PYTQALLSAV PIPDPAVEAE RKVIILKGEV PSPLNPPSGC VFHPRCFKAF EDCPKIVPVM GEVSPGHHVA CLLYKECWP
|
| |