| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_916 |
|---|
| Symbol | ssb |
|---|
| ID | 8657848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 849529 |
|---|
| End bp | 849936 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | single-stranded DNA-binding protein |
|---|
| Protein accession | YP_003330364 |
|---|
| Protein GI | 270308306 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000000232202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAGTT TGAATAAGGT TATGATAATT GGCAATGTTG GCGGTGAGCC GGAGATGCGG
TATACCCCCA GCGGGCATCC TGTTACCTCC TTTAAAGTTG CTACCAACTG GGTTTATAAT
ACCCCCGAGG GTGAACGCAA ACAGGAAACT GAATGGTTTA CGGTAGTTGC TTGGAACAAG
CTGGCTGAAC AGTGCAACCA GTTCCTTTCC AAAGGGCGGC TGGTGTACGT GGAAGGACGG
CTTCGCACCC GAAGCTGGGA AGGACAGGAT AATCTGAAAC ATTACCGTAC CGAGGTAATT
GCTTCCAGGG TTACCTTCCT TGAGAAAGCC AGTGCAGGTA CCGGGATGGA TGCCCGTGAT
GATGACAATG GCGGCGGTGA ATTAGAACCG GAAGACATTC CGTTTTAG
|
|---|
| Protein sequence | MVSLNKVMII GNVGGEPEMR YTPSGHPVTS FKVATNWVYN TPEGERKQET EWFTVVAWNK
LAEQCNQFLS KGRLVYVEGR LRTRSWEGQD NLKHYRTEVI ASRVTFLEKA SAGTGMDARD
DDNGGGELEP EDIPF
|
|---|
| |