| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_887 |
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| Symbol | |
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| ID | 8657819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 820753 |
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| End bp | 824529 |
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| Gene Length | 3777 bp |
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| Protein Length | 1258 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | |
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| Product | sensor histidine kinase/response regulator |
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| Protein accession | YP_003330339 |
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| Protein GI | 270308281 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGACA AAAGGCTGGA CTTAGAAACT TCCGAACTGC GATACCGCCG CCTTTTCGAA
ACCGCCCAAG ACGGTATTCT TATTGTTGAT GTAGTATCCG GTAAAGTAAC TGATATCAAC
CCATTTTTGT TAAATATGCT GGGATACACT CAGAAAGAAA TTCTGGATAA AAGAATCTGG
GAAATTAGTG TATTCCAAAA TATAGCTTCC AGCCGCAAAT CTTTTGACGA TCTGCAAAGA
AAAGACTATA TCCGCTATGA TGATTTTCCG CTTCTGACAA AAAACGGTAA AGTGCAGAAG
GTTGAATTTA CCAGTAATAT TTACCGGGTG GGTGAAGAGA AAATCCTCCA GTGCAATTTT
CGGGATATTA CAGACCGGAA ATTGGCCGAA GAAGAATTAC ACAAAACCGA GGAACTCTAT
CGGGAGTTTT ATCAGAAATC ACCAATTGGC TATCAATCAC TGGATTCCGA AGGCCGTTTT
ATAGAGATAA ATCAAGCCTG GCTAGATGAT ATGGGATACC AACGGGACGA GGTTATCGGG
CACTGGTTCG GGGATTTTTT ACTGCCTGAC CAGGTGGAGC TTTTTAGACA GCGTTTTTCC
GTTTTCAAAG CTACCGGCAA TGCCTCAACT GAGTTTTATA TGAGCCGAAA AAATGGTTCA
GTAGTGCTGA TGGCATTCAG CGGGAAAATA GCCCGTGATG CTAAAGGAAA TTTTAAACAA
ACACATTGTA CGTTGCAGGA TATCACCCAA AAGCATTTGG CGGAAGAAGC TATCAAGGAA
AACCAGCGTA AGTATAAAGC TCTTTTTGAA AGTATAAGCG ATGCGGTTTT TGTCTGCTAT
ATTGAAAGCC GCAAATGGTC TGATGAATTT GTTGAGCTGA ATAAAATGGC ATCTTCCATG
CTGGGGTATG ACCATGAAGA ACTGCTGAAA ATATCTGCAA AAAATCTGTT TTTTTACGCT
TCATCCGGTC TCCTGTTAAA AGAGACTACT GATGACCTGT ATGCGCAGCA TATGATAACC
CGTGAGTCAA ATCTGAGGCA TAAAGATGGA CATATTATCC CTGTGGAAAT AACATTCCAT
TTATTTGATT TGCAGGGCCG ACCGGCGGTG TTGACTCTGG CCCACGATAT CAGCAACCGT
AAAATAGCTG CCTATGAACT GGAACAAAGC CATAGTCGTT TGATAAAAGC CGAACAGGTA
GCCGGGTTCG GGTATTGGGA GTTTGATTTG TCAAGCGGGT TGGTGAATCC ATCTGAAGGA
GCCAGAGCGA TATATGGCTT GACAGAAGAT ACAGTGACCA TTCCTTTTGT TCAGATGATA
CCTGTCCCAG AATACCGTGC CTCTTTGGAT ACGGCGTTAA ATAACCTGAT TACCCAAAAT
ATTCCGTATG ATATCGAGTT CAAAATTAAG CGTCCTTCCG ATTGGGCTAT CTTATATATA
CACTCTATAG CAGAGTTTGA CCCTGAGCGG AATGTGGTTT TCGGGACTAT ACAGGATATT
ACTAAAAGAA AACAGGCTGA AGAATTGCTC CGTGTCAGTG AAGCCAGATT CCGCTCAACT
TTTGACCAGT CACCTATAGG TGCTGCAATA TATGATTCGG ATTTAAAATA CCGTCAGGTA
AATGATAAAT TCTGCCGGAT GTTAGGGTAC TCTGATAAAG AGCTTAATAG TTTGACAGTA
CGAGATATCA CTTATACAGA TGATTTAGAT CAGGATATAG ACCAATTAAA TCACCTGAAA
AACGGGGATA TAAACCGTTA TGAAACAGAT AAAAGATATC TCCACAAAAA TGGCAGTATT
TTCTGGGCAC ATATTTCAGT TGCGATTATC AAGGATTCAG ATGGTAACTT TTTATATTAT
CTGGCTATGA TTATGGATAT TACCGCACGC AAAGAAGCCG AAGATGCACT GCAAAAGTAC
AAACTAATTG CTGAAGACAG CCGGGATATT ATCCTTTTTA TGGATAGAAT AACAGGACAA
ATATTGGAAG CTAACAATGC AGCTGTAAAA GCTTATGGGT ATAGCCGTAA AGAACTGTTG
ACCATGAAAA TACAGGACCT GAGTAACCCT CAGGCTAAAA TGCTTACCGA AAAGCAGATT
GATTATGCTT ATGCTCACGG TATGCTTTTT GAAACTTCCC ATATGCGTAA AGACGGTAGT
ATTTTCCCGG TAGAGGTCAG TTCACGCGGA GCAGATATTG AAGGCACAAC AACCCTGATA
AATATTATCC GTGATACCAC TGCAAGGAAG CAGGCTGAAA ATGCACTTAA TGAAAGCTTG
CAAAATTATC AGGTGCTTTT TAACAGTGTT ACGGATGCTA TTTTAGTGCA TCAGCCTGAA
GCAGATTATT CAGTCGGGAA ATTTATAGAA GTAAATGATG CTGCCATGTC AATGTTGGGC
TACAACCGGA AAGAACTGCT GCAAATTACT CCGGCGGAAA TTTTACTGGA TGGCAAATAT
CGGATAGATG AAGCCCCCGA TATTATAAGA AACGTGGAGC AAAGCAATGA AGTGGTAGCT
GAGTATACAC TGGTAACCAA AAAAGGCGAA TTAATCCCAG TGGAATTGCA TTCACGTATG
TTTGAACTTG GTGGTAAGCG TACTGTTATT ACACTTGCCA GAGATATACG CGAACGTAAA
AAGCTGGAAG AGGAACAGAA AAAACTGCGT TACCAGTCAG AGATGTCCAG CCGTTTGGCG
GCAGTAGGCG AAATGGCGGC TGGCATTGCA CATGAGATAA ATAACCCTCT CACCGGGGTA
ATAGGTTTTG CCTCTATACT TATGGAAAGG GAAGATTTAC CAAGAGATGT AATGGAGCAG
CTCCAGATAA TAAATTCCGG CAGCCAAAGG GTAGTAGATA TTGTAAAACG TATGCTTACG
TTTGCCCGTC AAGCCAAACC GGTCAGACAT CAGGTAAATA TTACCGAACT TATTGATAAT
ACCTTGGAGT TACGCAGTTA TGTGCTTAAA ACTGCCAATA TAGCTGTGAT AAAGCAATAT
GAGCCTGGCC TGCCGTTATT GACGGTTGAC CCCGGCCAGA TGCAACAGGT AATTTTAAAC
TTGATACTGA ATGCAGAGTA TTCTATGAAA AAAGCTCATG AAAAAGGTAC TCTGAATATC
ACTGTTAGCA AAGCCGGTGA TAGGGTGAAA CTGTCTTTCC GTGATGACGG GTTGGGTATG
CCGCCTGAAA TACTGGCAAA ACTATTCCAG CCGTTTTTTA CTACCAAAGA ACCCGGTGAA
GGTACCGGTT TGGGTCTAAG CCTGTCACAT GGCATTATTC TGGAACATGG AGGTACTATT
CGGGGTGAGA GTACACCCGG TGAAGGAGCT GAATTCATTA TTGAACTGCC GGTAATGATT
TCAGATAGAA TGCCTGCAGT TACTGACCCA AATGCTGCGG TTCAAAGTCC AACCCAAAAA
GCATCAATAC TGGTAATTGA TGATGAAGCT GCAATTCGGA CACTGATACG GATTGTGCTT
GTTCAGGATA GTTACAAAGT GGATGAGTGT GCCGTGCCTC AGGAAGCTAT GTCTATGATT
GAAAAAAATA AATACGATGC AATTCTCTTA GATATACGTA TGCCCGGGGT GAGTGGAATT
GAACTTTATT CAGAGATAAT CGCCAAATGG CCGAAATTGG CTAAACGGGT TATCTTTATT
ACTGGTGATA CATCCAGTGA GCTTTTGATT AACCATGATA TCCCGTGTAT TAAAAAGCCA
TTTAATATTG CAGTGTTAAA AAGTGCTCTG GCCAAGATAC TTTCAAAAGC AGACTGA
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| Protein sequence | MNDKRLDLET SELRYRRLFE TAQDGILIVD VVSGKVTDIN PFLLNMLGYT QKEILDKRIW
EISVFQNIAS SRKSFDDLQR KDYIRYDDFP LLTKNGKVQK VEFTSNIYRV GEEKILQCNF
RDITDRKLAE EELHKTEELY REFYQKSPIG YQSLDSEGRF IEINQAWLDD MGYQRDEVIG
HWFGDFLLPD QVELFRQRFS VFKATGNAST EFYMSRKNGS VVLMAFSGKI ARDAKGNFKQ
THCTLQDITQ KHLAEEAIKE NQRKYKALFE SISDAVFVCY IESRKWSDEF VELNKMASSM
LGYDHEELLK ISAKNLFFYA SSGLLLKETT DDLYAQHMIT RESNLRHKDG HIIPVEITFH
LFDLQGRPAV LTLAHDISNR KIAAYELEQS HSRLIKAEQV AGFGYWEFDL SSGLVNPSEG
ARAIYGLTED TVTIPFVQMI PVPEYRASLD TALNNLITQN IPYDIEFKIK RPSDWAILYI
HSIAEFDPER NVVFGTIQDI TKRKQAEELL RVSEARFRST FDQSPIGAAI YDSDLKYRQV
NDKFCRMLGY SDKELNSLTV RDITYTDDLD QDIDQLNHLK NGDINRYETD KRYLHKNGSI
FWAHISVAII KDSDGNFLYY LAMIMDITAR KEAEDALQKY KLIAEDSRDI ILFMDRITGQ
ILEANNAAVK AYGYSRKELL TMKIQDLSNP QAKMLTEKQI DYAYAHGMLF ETSHMRKDGS
IFPVEVSSRG ADIEGTTTLI NIIRDTTARK QAENALNESL QNYQVLFNSV TDAILVHQPE
ADYSVGKFIE VNDAAMSMLG YNRKELLQIT PAEILLDGKY RIDEAPDIIR NVEQSNEVVA
EYTLVTKKGE LIPVELHSRM FELGGKRTVI TLARDIRERK KLEEEQKKLR YQSEMSSRLA
AVGEMAAGIA HEINNPLTGV IGFASILMER EDLPRDVMEQ LQIINSGSQR VVDIVKRMLT
FARQAKPVRH QVNITELIDN TLELRSYVLK TANIAVIKQY EPGLPLLTVD PGQMQQVILN
LILNAEYSMK KAHEKGTLNI TVSKAGDRVK LSFRDDGLGM PPEILAKLFQ PFFTTKEPGE
GTGLGLSLSH GIILEHGGTI RGESTPGEGA EFIIELPVMI SDRMPAVTDP NAAVQSPTQK
ASILVIDDEA AIRTLIRIVL VQDSYKVDEC AVPQEAMSMI EKNKYDAILL DIRMPGVSGI
ELYSEIIAKW PKLAKRVIFI TGDTSSELLI NHDIPCIKKP FNIAVLKSAL AKILSKAD
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