Gene DhcVS_864 details

Gene Information

• Locus tag: DhcVS_864
• Symbol: rplA
• ID: 8657796
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: -
• Start bp: 804723
• End bp: 805436
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 48%
• Product: ribosomal protein L1
• Protein accession: YP_003330319
• Protein GI: 270308261

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.00524668
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAACAC GCGGTAAAAA ATATCAGGAC GCAATAAAAC TGCTTGACCA GAGTTTGGCT 
TACGCTCCGG CTGAAGCTAT TAATATGGCC AAGAAAATGG CTGCGGCAAA GTTTGATGAG 
ACCGTTGAAA TGCATCTGAA GATGGGCCTT GATCCTAAAA ATGCTACCCA GCAGTTGCGC 
GGTGTAGCCG TATTGCCCCA TGGGTTAGGT AAAACCGTAC GTGTATTGGT ATTCGCCCAG 
GGTGAAGCTG AAAAAGCGGC TCAAGCGGCC GGTGCTGATG TATACGGTGG TGAAGAGCTT 
ATAAAGAAGG TTGAAGCCGG TTTCCTTGAT TTTGATGTTG CTATATCTAC CCCTGACATG 
ATGAGCAAAG TTGGTAAACT TGGTAAAGTT CTGGGCCGGC GCGGTCTTAT GCCTAACCCT 
AAGAGCGGCA CTGTAGTCCC TGCTGAAGAT TTCAAACAAG TTGTTACCGA AGCCCGCAAA 
GGACGTGTGG AATTCAAACT GGATCGTTCA GGCATTGTAC ATATCGTATT GGGCAAGGCC 
AGTTTTGAAG GTCAGGCTTT GCTGGAGAAT ATGACCTCTG TGATAGATGC TATTATACGT 
TCAAAGCCCA CCGGTGCCAA AGGCCAGTAC ATCAAGAGTG CTTATCTGGC TACTACCATG 
GGGCCTGGTG TAAAGATGGA TCTCAGGGCT GTGTCTGCCA TGGGTGGCGC ATAA 

 

Protein sequence

MVTRGKKYQD AIKLLDQSLA YAPAEAINMA KKMAAAKFDE TVEMHLKMGL DPKNATQQLR 
GVAVLPHGLG KTVRVLVFAQ GEAEKAAQAA GADVYGGEEL IKKVEAGFLD FDVAISTPDM 
MSKVGKLGKV LGRRGLMPNP KSGTVVPAED FKQVVTEARK GRVEFKLDRS GIVHIVLGKA 
SFEGQALLEN MTSVIDAIIR SKPTGAKGQY IKSAYLATTM GPGVKMDLRA VSAMGGA