Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_836 |
Symbol | fabF |
ID | 8657769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 776373 |
End bp | 777641 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | 3-oxoacyl-[acyl-carrier-protein] synthase II |
Protein accession | YP_003330292 |
Protein GI | 270308234 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGATA ACCAGCCCCA AAACAGGGTT GTCATAACCG GTATCGGTAT TGTCAGCCCT CTTGGACTTG ATACCCAGAC CACCTGGGAA GGCCTAATAA ACGGACGCTC AGGTATAGAC CATATCAGCC TCTTTGACGC ATCAAATCTG GCAGTCCGTT TCGGCGGAGA AGTTAAAGAT TTTGACCCTG CAAATTATAT ATCCCGCAAG GATATCCGCC GTATGGACCG CTTTGCCCAG CTGGCAGTAG CCGCCGGAAA ACAAGCACTT GAAAATTCAG GTCTAAATAT AAATGAATGC ACCAGTCAGG ATATCGGGGT AATTGTAGGC AGCGGTATAG GCGGACTTTC GGTTCTTTTT GAACAAATCA AAGTTTTCCT GGAACAGGGG CCGGACAGAG TCAGTCCCTT TTTAGTACCC ATGATGATTG CAGACATGGC TGGAGCTCAG GTATCTATCC AGCTGGGTCT TAAAGGGCCT AATTTCTGTA CTACTTCGGC CTGTTCTTCG GGGTCAGACG CCATAGGCAC AGCTTTTGAA AAAATACGTT TCGGTTCTGC TAAAATCATT TTGGCGGGCG GTGCCGAATC CATTATGAAC CCGGTAGGTT TTGCCGGTTT TTCAGCCCTA AAAGCCCTGT CTACCCGCAA TGAAGACCCC CAGACAGCTT CACGCCCATT TGACGCCAAC CGGGACGGCT TTGTTATTGC AGAGGGTGCG GCGATTATGG TACTCGAAGA ACTGCAAGCC GCCAAGGCCC GCGGGGCGAA TATTATTGCC GAGATAATTG GTTACGGCGG TTCTTCAGAC GCTTTTCATA TTACCCAGCC AGTGGAATCC GGAGTTGAGG CCGCACGTGC CATAAACATA GCCCTTAATA GCGCCGGCAT CAAACCGGAA GCAGTAGATT ATATAAATGC CCATGGCACT TCTACTCCGC TCAATGACAA AATGGAAACC AACGCTATAA AAGTTGCATT CGGAGAACAT GCCCGAAAAC TGGCTATCAG TTCCACCAAA TCTATGCTGG GGCATCTCAT AGGCGGGGCT GGGGCTATTG AAGCATCTAT ATGCGCGCTG ACTATTAAAA ACGGAATTAT ACCTCCAACC ATAAACTACA CTACGCCTGA TCCAGATTGT GATCTGGATT ACACACCCAA CACCGCCCGC AAAGCCAACG TAAAGGTGGC ACTCAATAAT TCGTTTGGGT TCGGCGGGCA CAATTCGGTG CTTATCCTCA GGGAAATGGG CAGTGAAAAT ATTGGCTAA
|
Protein sequence | MTDNQPQNRV VITGIGIVSP LGLDTQTTWE GLINGRSGID HISLFDASNL AVRFGGEVKD FDPANYISRK DIRRMDRFAQ LAVAAGKQAL ENSGLNINEC TSQDIGVIVG SGIGGLSVLF EQIKVFLEQG PDRVSPFLVP MMIADMAGAQ VSIQLGLKGP NFCTTSACSS GSDAIGTAFE KIRFGSAKII LAGGAESIMN PVGFAGFSAL KALSTRNEDP QTASRPFDAN RDGFVIAEGA AIMVLEELQA AKARGANIIA EIIGYGGSSD AFHITQPVES GVEAARAINI ALNSAGIKPE AVDYINAHGT STPLNDKMET NAIKVAFGEH ARKLAISSTK SMLGHLIGGA GAIEASICAL TIKNGIIPPT INYTTPDPDC DLDYTPNTAR KANVKVALNN SFGFGGHNSV LILREMGSEN IG
|
| |