Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_767 |
Symbol | echH |
ID | 8657700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 714084 |
End bp | 716009 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | hydrogenase subunit, NADH dehydrogenase subunit E subfamily |
Protein accession | YP_003330226 |
Protein GI | 270308168 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCCAA GACTAAATAC TCCGGCTGAG CTGGAAATAC TGCGAAAAAA ACTGGTTGAA AAACAGTCTG CCAACCGTCT CTGCATAACG ATATGTTGCG GCACCGGTTG CCGGGCTTTG GGTTCAGTAA AACTGGTAGA CGCTTTCCGA AATGAGCTTG CCAAGCAAGA GCTGGACAAT CAGGTTGATA TCAAAGAGAC CGGTTGTCAT GGTTTTTGTG AAAAAGGTTC GGTAGTTGTT ATATATCCCC AAAATATTTG CTATTTCCAC GTTAAACCTG AAGATGCCGC TGATATTGTG GATAAAACAA TTAAAAACGG CGCACTGGTG GAACGTTTGT TGTATACAGA CCCCGCTACC GGTGAAAAAC TTGTTTATCA TCATGATATC CCCTTTTATA AATATCAGGA ACGGACTGTA CTGGGTGATA ATGAACATAT TAATCCTCAG AATATAGAGG ATTATATCCA GAGAGGCGGT TATGCCGCAC TAGTTAAAAC TCTTTTCCAC ATGACACCTG AATCAGTACT GGACGAAGTG GACAAAGCTA ACCTGCGGGG GCGCGGTGGC GGCGGTTTCC CGGCCGGTAA AAAGTGGCGA ACTACCCGTG ATGCCGCAGA CCCTGTCAAA TATGTACTAG TTAACTGTGA CGAAGGTGAC CCGGGGGCAT TTATGGACCG TTCCATCATG GAGGGGAATC CCCACTGCGT ATTGGAAGGT CTAGCTATCG GGGCTTTTGC AATCGGTGCA AAAGAAGGTT ATATATATGT CCGTGCTGAA TATCCTCTGG CGGTGGAAAA CCTGTATGCT GCCATAAGGC AGGCAGAGGA GTATGGTCTG CTTGGTAAAA ATATACTTGG CTCCGGCTTT GATTTTATTG TCAAAGTCCA CGAAGGCGCA GGCGCTTTTG TTTCCGGCGA ATCTTCGGCC CTAATGACTG CCATTGAAGG ACGGGTCGGT GAACCCCGCC CCAAATATAT CCGCACTGCT ATCAAGGGGC TCTGGGATAA ACCCTCAAAT CTAAATAACG TGGAAACCTG GGCTAATGTC CCCCATATTA TAAACAAAGG GGCGGAGTGG TTCAGGTCTA TCGGTACCGA AGGCAGCAAA GGCACCAAAA TATTTGCTTT GGTTGGTAAA GTTAACAATA CCGGACTGGT AGAAGTGCCT ATGGGTACTA CCCTCCGGGA CATTATATTT AAAATAGGCG GCGGCCTGCG TGACGGCAAA AAAATAAAAG CTGTACAGAC AGGCGGCCCG TCAGGCGGCT GCATACCCGA AAACCTGCTG GATTCGCCTG TTGATTATGA TGCGCTGAGT AAACTGGGTT CTATGGTAGG TTCAGGCGGG CTTATCATAA TGGACGAAGA AACCTGCATG GTAGATATTG CCCGCTATTT TATAAACTTT CTTTCAGACG AATCCTGCGG AAAATGCCTG CCCTGCCGCG AGGGACTTCG CCAACTGGTA GATATACTTA CCCGTATCAC CGAAGGCAAA GGCACTATGG CAGATATGGA TACGCTTGAA GACCTGAGCG GGGTGATGAG TGAAGCCTGC CTGTGCGCTT TGGGACAGCA AGCCCCCAAT CCACTGCTGA CCACCCTTAA ATATTTCCGT CACGAATATA TTGACCATAT TAAAAACAAA CACTGCGAAG CCGGTGTCTG CAAAGCCTTG CTTACTTTCT ATATTGACCC TGAAAAATGC AAAGCCTGTA TGATCTGCGC CCGAAACTGC CCCACTGATG CCATCAAGGG CGGCAAAGGA CTTATTCATA CTATAGAACA GGATAAATGC ATCAAGTGCG GTGCCTGTCT GGATACCTGC CCCGCCAAAT TTGATGCGGT CAGGAAAATA TCCGGCAAGC CTATCCCACA AAATGTACCG TCTGAACCTA TTCCTTTAAA CCGGAAGGCA GAATAA
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Protein sequence | MMPRLNTPAE LEILRKKLVE KQSANRLCIT ICCGTGCRAL GSVKLVDAFR NELAKQELDN QVDIKETGCH GFCEKGSVVV IYPQNICYFH VKPEDAADIV DKTIKNGALV ERLLYTDPAT GEKLVYHHDI PFYKYQERTV LGDNEHINPQ NIEDYIQRGG YAALVKTLFH MTPESVLDEV DKANLRGRGG GGFPAGKKWR TTRDAADPVK YVLVNCDEGD PGAFMDRSIM EGNPHCVLEG LAIGAFAIGA KEGYIYVRAE YPLAVENLYA AIRQAEEYGL LGKNILGSGF DFIVKVHEGA GAFVSGESSA LMTAIEGRVG EPRPKYIRTA IKGLWDKPSN LNNVETWANV PHIINKGAEW FRSIGTEGSK GTKIFALVGK VNNTGLVEVP MGTTLRDIIF KIGGGLRDGK KIKAVQTGGP SGGCIPENLL DSPVDYDALS KLGSMVGSGG LIIMDEETCM VDIARYFINF LSDESCGKCL PCREGLRQLV DILTRITEGK GTMADMDTLE DLSGVMSEAC LCALGQQAPN PLLTTLKYFR HEYIDHIKNK HCEAGVCKAL LTFYIDPEKC KACMICARNC PTDAIKGGKG LIHTIEQDKC IKCGACLDTC PAKFDAVRKI SGKPIPQNVP SEPIPLNRKA E
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