| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_753 |
|---|
| Symbol | birA |
|---|
| ID | 8657686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 702282 |
|---|
| End bp | 703070 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | |
|---|
| Product | biotin--acetyl-CoA-carboxylase ligase/ BirA family transcriptional regulator |
|---|
| Protein accession | YP_003330213 |
|---|
| Protein GI | 270308155 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGT CTTGTATATC TATAAATGAT ATCCGAAATA ACCTGCACAC CTGTTTTATG
GGAAGGGAAA TAATTTATCT GCCGGAAACT GCATCTACCC AGACCGTAGC AATGGATATG
GCACGCAAAG GTGCCGAAGC CGGTACAGTG ATAATAACCG AAAGGCAAAC AGAAGGACAT
GGACGTTTGA AACGGTTGTG GTTATCACCC CAGGGTAACA TATACATGTC ATTTATACTG
CACCCCAATC AAAATGAACT TTCACGCTTG ATAATGGCTG CTTCACTGGC AGTCAGTTTT
GCCATAGAAG ATACCACCGG TATAATGACC GAATTGAAAT GGCCGAATGA TATCCTGATA
AAAGGTAAAA AAGTATGCGG AATGCTGATA GAAAATGATA TACGGGACGG ACAGGTGAAT
TCCAGTGCGG TAGGGCTGGG TATAAATGTA AATACCGATA TGCAAACCTA CCCCGAACTA
AGAGATATTG CAACCAGCCT GATAAACCAT ACCGGGAAAC CTGTAAGCCG TGAGAAACTG
ATACTTAGCT TTCTGCACGA GTTTGAAAGG CTGTATCTTT ATTTAAACGA ACACGGTGAA
TGTGTGTTTG AAATGTGGAA GAAACGGCTG ATTACACTAG GTAAAGAAGT AGACGTAACA
AGCGGCAGAG ATATTTATAG GGGGATAGTG GAAACTATCA ATCCGGATGG CAGCCTGAGA
ATACGGCTGG CGGATGGTAA TCTGGTGTAT ATAATGGCGG GTGATGTAAG CCTGCGGCAT
GCTGACTGA
|
|---|
| Protein sequence | MSMSCISIND IRNNLHTCFM GREIIYLPET ASTQTVAMDM ARKGAEAGTV IITERQTEGH
GRLKRLWLSP QGNIYMSFIL HPNQNELSRL IMAASLAVSF AIEDTTGIMT ELKWPNDILI
KGKKVCGMLI ENDIRDGQVN SSAVGLGINV NTDMQTYPEL RDIATSLINH TGKPVSREKL
ILSFLHEFER LYLYLNEHGE CVFEMWKKRL ITLGKEVDVT SGRDIYRGIV ETINPDGSLR
IRLADGNLVY IMAGDVSLRH AD
|
|---|
| |