| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_691 |
|---|
| Symbol | |
|---|
| ID | 8657624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 646513 |
|---|
| End bp | 647166 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | metallo-beta-lactamase |
|---|
| Protein accession | YP_003330156 |
|---|
| Protein GI | 270308098 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.664332 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCCAAA ATATTATCCT TAAGGACCAT GCAAATATGC TTAACCGCAA ACTTCGCTTA
GGTTTACTGG GCACAAACTG CTATATACTG GGTGATGAAG AAAGCCGTGA GGGGCTTATC
ATAGACCCGG CTGCTATCTC AAACTCAATC CTCGAAACAG TGACCGAGCA CCATCTGAAT
ATAAAATATA TCTTACTTAC CCACGGGCAT CTTGACCACC TAGCAGGGCT GGAATATGTC
CGGAAACTTT ACCCCGAAGC TAAACTCTGC TTTAACCTTT CGGATGCCAG CTTAAGTGAA
AATATTGAGC TGGTAAGTTA CCTGGGAATG CCCGAACTGC CAAACCTTGT GCCGGATATT
CCGCTTGATG AAGGCAGTAC ACTGGAACTT GGCAAAACCA GGTTTTCGGT TATTTCTACA
CCTGGACATA CACCAGGCGG TATCTGTTTG TACACGCCGG GTTATTTGTT CAGTGGGGAT
ACCCTTTTTA ACTCCGGAAT AGGGCGGTCA GATTTTGAGG AAAGTGATAC CGAAGCTTTG
CGGCAGAATA TAATAAACAG GCTGCTCAGC CTTCCACCTG AAACCCTTGT CTTCCCAGGA
CACGGCAGGG AAACAACGAT TGGCAAAGAA AAGGCCGGCA ACCCGTTTAT TTAG
|
|---|
| Protein sequence | MCQNIILKDH ANMLNRKLRL GLLGTNCYIL GDEESREGLI IDPAAISNSI LETVTEHHLN
IKYILLTHGH LDHLAGLEYV RKLYPEAKLC FNLSDASLSE NIELVSYLGM PELPNLVPDI
PLDEGSTLEL GKTRFSVIST PGHTPGGICL YTPGYLFSGD TLFNSGIGRS DFEESDTEAL
RQNIINRLLS LPPETLVFPG HGRETTIGKE KAGNPFI
|
|---|
| |