| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_659 |
|---|
| Symbol | thrS |
|---|
| ID | 8657592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 616171 |
|---|
| End bp | 617919 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | threonyl-tRNA synthetase (thrS) |
|---|
| Protein accession | YP_003330126 |
|---|
| Protein GI | 270308068 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000328118 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACC AAATAGATGA ATCAAAGCCC ATAAGCGACC TTGAAATCAT GCGTCACTCC
GCCGCCCATA TTATGGCTGA AGCGGTCTTG TCCATGTTTC CTGAGGCCAA GCTTGGCATA
GGGCCGGCTA TTGATACCGG TTTTTACTAT GATTTTGACC TGCCCCGCAC CCTCACACCA
GAAGACCTGC CTGAAATAGA AACCCGGATG AATCAGCTGG TAAAGGCTAA TCTGCCTTTC
AGGCGTGAAG AAATGTCTAA AGATGAAGCC CGAAAACTTT TTGCCGACCA GCCGTATAAA
CTGGAGCTAC TGAATGATAT CCCTGACGAA ACCGTAAGTA TTTACCGTCA GGGTAACTTT
TGTGATCTCT GCCGCGGGCC TCACGTCAAC TACACCAGCA AGGTAAAGGC TTTTAAGCTT
TTGTCTATTG CAGGTGCCTA CTGGAGAGGT GACGAAAAAC GCCCCATGTT GCAGCGTATA
TACGGGGCAG CCTTTTTGGA TAAAGCCTCT CTGGCAGACT ATTTGAATAT GATTGAAGAA
GCCGCTAAAC GCGATCACCG TAAACTGGGC AAAGAACTGG AGCTGTTTTC ATTACATCAG
GAAATAGGGG GCGGTCTGGT AAACTGGCTG CCAAACGGTG CTACAATACG ACACCTGATT
GAAGAATTCT GGAAAAAAGA GCACCTCAAA CGGGGTTATA ATCTGGTTTA TACCCCCCAC
ATAGCCAAAG TAGACCTCTG GAAAACAAGC GGGCACTGGG GTTTTTACCG CGAAAATATG
TATAGCCCTA TGGATATTGA CGGCGAAGAG TATGTACTTA AGCCAATGAA CTGTGTTTAC
CATATCCTCA TGTTTAAAAA CCGCACCCGC TCATACAAAG AACTGCCTAT CCGTATGGCT
GAACTGGGTA CTGTTTACCG TTATGAACGC TCAGGTGTTT TACACGGACT TTCAAGGGTA
CGCGGTTTTA CCCAGGATGA CGCCCATATA TTCTGTTTAT ATGAACAGTT GGAAAAAGAA
GTTGTAAAGG TTCTTGATCT GGCAAAATTC ATGATTGACA CCTTCGGCTT TGCCAAATAC
AAGGTTATGC TTTCAACTCG TCCCGAAAAA TATGTGGGCG AGTTGGCTAA ATGGGAATAT
GCCACTGATA TTTTGGCAAA AGCTCTGGAA GCCAACGGGA TTTCTTATCA GGTAGACCCT
GGAGAGGGTG TCTTCTACGG CCCCAAGATT GACATAAAAT TCGAAGATGC CTTGGGACGC
GCATGGCAAG GACCAACTAT TCAAGTGGAT TTCCAATTGC CCGAACGTTT TGAAGTTAGC
GTGGTAGGGG AGGACGGCAA GGACCAGCCG GTAGCTATGG TGCACCGCAC AGTACTAGGC
AGCATGGAAC GGTTTATGTC CTGTTTAACC GAACAATATG GTGGTGCTTT CCCTGTCTGG
CTGTCACCAA AGCAGGTTAT GATAATACCC ATTGCCGATA GGCATAGCGA ATTTGCTGAA
AAACTGGCTT GTGAACTCAG GGAAGAAGAG GTTAGGGTAG AGGTAGATAA TCGCTCCGAA
ACTATGAACC AGAAAATCCG TCAGGCTCAA CTTGCTAAGA TACCATACAT GCTGGTAGTT
GGAGACAAAG AGATTGAAAC CGGGAGTATA GCCCTGAGAA GTCGTATCGG CAGCCAGCAG
GTAATGCCGT TTGCAGAGTT CAAATCTATG CTCCTTAATA AAATAAAAAC CAAGTCTACA
GAGATTTGA
|
|---|
| Protein sequence | MANQIDESKP ISDLEIMRHS AAHIMAEAVL SMFPEAKLGI GPAIDTGFYY DFDLPRTLTP
EDLPEIETRM NQLVKANLPF RREEMSKDEA RKLFADQPYK LELLNDIPDE TVSIYRQGNF
CDLCRGPHVN YTSKVKAFKL LSIAGAYWRG DEKRPMLQRI YGAAFLDKAS LADYLNMIEE
AAKRDHRKLG KELELFSLHQ EIGGGLVNWL PNGATIRHLI EEFWKKEHLK RGYNLVYTPH
IAKVDLWKTS GHWGFYRENM YSPMDIDGEE YVLKPMNCVY HILMFKNRTR SYKELPIRMA
ELGTVYRYER SGVLHGLSRV RGFTQDDAHI FCLYEQLEKE VVKVLDLAKF MIDTFGFAKY
KVMLSTRPEK YVGELAKWEY ATDILAKALE ANGISYQVDP GEGVFYGPKI DIKFEDALGR
AWQGPTIQVD FQLPERFEVS VVGEDGKDQP VAMVHRTVLG SMERFMSCLT EQYGGAFPVW
LSPKQVMIIP IADRHSEFAE KLACELREEE VRVEVDNRSE TMNQKIRQAQ LAKIPYMLVV
GDKEIETGSI ALRSRIGSQQ VMPFAEFKSM LLNKIKTKST EI
|
|---|
| |