Gene DhcVS_541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_541 
SymboltyrS 
ID8657480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp506882 
End bp508072 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content51% 
IMG OID 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_003330021 
Protein GI270307963 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.32758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAG CGGAAAACCG GATAGACCAG ATTTTGAAAC GGGGCGTAGC TGAGGTAATT 
GTAGAAGAAG ACTTTAAAAA ACTGCTTCTT TCGGGTAAAA AGCTCCGCCT GAAAGAAGGC
TTTGACCCCA GTTCGCCGGA TATCCATCTG GGACACATGG TAGCCCTTAG GAAACTCCGC
CAGCTGCAAG ACCTGGGGCA TCAGGTAGTT TTGATAGTAG GAGACTGGAC CGCCCAGATT
GGTGACCCTT CCGGCGCTTC TGTCACCCGC CCCATGCTTT CGGCCGAGCA GGTAAAGGCA
AATGCCAAAA CCTATCTGGA GCAGTTTTTC AAGATTGTAG ATAAAGATAA AACCGAAGTC
CGCTGGCAAA GCGAATGGTA CGCTAACTTT AAACTGGAAG ACGTAGTCCG CCTTTCTTCC
AAATTTACCG TAGCCCAGAT GCTGGCCAGA GACGATTTTG CCAAAAGATA TGCTGCCGGC
AAACCCATCA GCGTAACCGA ACTGCTCTAC CCCATGCTGC AGGCTTATGA CTCTGTCATG
GTGAAATCTG ACGTGGAGTT CGGGGGGACA GACCAGAAGT TTAACCTGCT GGTAGGACGT
GAACTGCAGG AAATGCTGGG GCAGAAACCC CAGCAGGTGC TAATGGTACC CATACTGGTA
GGCACTGACG GCGTCCACAA AATGAGCAAA AGCCTGGGCA ACTATATCGG CGTAGCCGAA
GAGCCCACCG AAATATTCGG CAAGTGCATG TCTATCCCGG ATGAGCTGAT ACTCCAGTAT
TTTGAACTGG TGACCGATAT ACCCGCAACC GAAATAGCTG ATTTTAAAAA CCAGATGGCA
AACGGTCTGA TAAACCCCAT GGTACTTAAA AAACGCCTGG CCCGCGAGCT GATAACCCAG
CTTTACAGCA CAGCTGCCGC CGAAGAGGCA GATGCCCAGT TTACCCGGGT GGTGCAGCGG
GGTGAAATAC CGGAGGATAT GCCGGAATGC CGCCTGGAAA ACGGCAAAAG TATCTGCGTG
ATAGATTTTA TTATCAAGGC GGACCTTGCC AAGAGCAAAA GCGAAGCCCG CCGCCTGCTG
GAACAGGGCG GAGTGGAAAT AAATTCCGCT AAAATATCAG ACCCCGGTAC AACTGTAAAA
TGCGGTGATA TAATAAAAGC CGGCAAGAGA CGCTACTCCA AAGCTGTCTA G
 
Protein sequence
MNQAENRIDQ ILKRGVAEVI VEEDFKKLLL SGKKLRLKEG FDPSSPDIHL GHMVALRKLR 
QLQDLGHQVV LIVGDWTAQI GDPSGASVTR PMLSAEQVKA NAKTYLEQFF KIVDKDKTEV
RWQSEWYANF KLEDVVRLSS KFTVAQMLAR DDFAKRYAAG KPISVTELLY PMLQAYDSVM
VKSDVEFGGT DQKFNLLVGR ELQEMLGQKP QQVLMVPILV GTDGVHKMSK SLGNYIGVAE
EPTEIFGKCM SIPDELILQY FELVTDIPAT EIADFKNQMA NGLINPMVLK KRLARELITQ
LYSTAAAEEA DAQFTRVVQR GEIPEDMPEC RLENGKSICV IDFIIKADLA KSKSEARRLL
EQGGVEINSA KISDPGTTVK CGDIIKAGKR RYSKAV