Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_423 |
Symbol | rpsC |
ID | 8657364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 403227 |
End bp | 404063 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | ribosomal protein S3 |
Protein accession | YP_003329906 |
Protein GI | 270307848 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000652723 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACGCA AAGTTCATCC AATCGGGTTT AGACTTGGCA TTATTAAAGA CTGGAGTGCT AAATGGCATG CCAGTGATAA GGGTTTTGCC GAATGCCTCA CCGAAGACCT TAAGCTTCGC AAGGCTATTG CCAAGAAGTA TGTAGATGCC GCTATCTCTC AGGTGGATAT TGAGCGCCAG TCCAATAAGG TGACTGTTTC TGTCCGGACT GCCCGGCCGG GTATTGTTAT CGGACGGGGC GGTCAGCGTG TTGATGAAAT GCGCCATTTC CTTGAGGAGC TTATCGGCAA AAAGGTACAG CTGAATATTG TTGAAATATC TCAGGCTGAG CTTGACGCCT TCCTGGTTGC CCGGAGTGTG GCAGAGCAGA TTGAACGCCG TGTTGCTTAC CGGCGCGCCA TGAAGCAGGC CATTTTCCGC AGCATGCAGG CCGGTGCCAA GGGTATTAAA GTATGTGCCT CAGGACGTTT GGGCGGCGTG GAGATTGCCC GGCGTGAGGT AATGCACGAA GGGCGTGTTC CTTTACATAC TCTTCGGGCT GACATTGATT ACGGCTGCAC CAGGGCTCAC ACTGCCCTTG GAGATATAGG CATAAAGGTA TGGGTATACC GTGGTGATAT CCTGCCTGAA GCAAAAGAAA AATCTGAATC CGAAGTAACG GAAATGGCTG CTGTTATGGC TGATGCTCCT GCTGCCGCTG TTTCCGAAAC TAAGGTTGCT GATACTGTGG CCAAACCCAA ACGGGTTGCA AAAAAGGCCG AAGCCGAGGC TCCCGCTGAA GAAAAACCGA AGCGCGCAGC CAAAAAGGCT GAGAACATAA CCAAGGAAGA GGAATAA
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Protein sequence | MGRKVHPIGF RLGIIKDWSA KWHASDKGFA ECLTEDLKLR KAIAKKYVDA AISQVDIERQ SNKVTVSVRT ARPGIVIGRG GQRVDEMRHF LEELIGKKVQ LNIVEISQAE LDAFLVARSV AEQIERRVAY RRAMKQAIFR SMQAGAKGIK VCASGRLGGV EIARREVMHE GRVPLHTLRA DIDYGCTRAH TALGDIGIKV WVYRGDILPE AKEKSESEVT EMAAVMADAP AAAVSETKVA DTVAKPKRVA KKAEAEAPAE EKPKRAAKKA ENITKEEE
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