Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_417 |
Symbol | rplC |
ID | 8657358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 400171 |
End bp | 400788 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | ribosomal protein L3 |
Protein accession | YP_003329900 |
Protein GI | 270307842 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000036263 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCAAG GTATTATCGG TAAAAAAATC GGTATGACCC AGATATTCCA GGAGGACGGC AAGGCTCAGC CGGTCACTCT GGTAGAAGCT GGTCCGTGTG TAGTGGTCCA GGTCAAGACC GAAAAACAGG ACGGCTATGA AGCTGTTCAG CTGGGTTACG GCAAGGCCAA GCATATCACT TCAGCTGTCA AAGGGCAGTG CAGAGGATTC GGTGAATTCA AAGTACTGCG CGAAGTAGAC GTGGACGATA TTGCGACGGT TAATGTCGGT GACCAGATTA CGGTCAGTGA CTTTAAGGAC GGCGAAAAGA TAGACGCCAG CGGCGTCTCC AGAGGGCGTG GTTTTGCCGG TGTAGTTAAA CGCTGGCATT TTGCCGGTGG TCCCAAAACC CACGGTCAGT CTGACCGTCA CCGGGCTCCG GGTTCCATCA GCTCCACCAC CACTCCCGGC CGTATTTATA AGGGCAAGCG CATGGCAGGC CACATGGGGA ATGATGCGGT GACTATCCGC AATCTGGTTG TGCTCAAAAC TGATGCAGAG AAAAATCTGC TTATGGTAAA GGGCGCTATT CCCGGCGGCA AGAATACAAT AATATTAATT AAGAAAACGG GTAAATAA
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Protein sequence | MIQGIIGKKI GMTQIFQEDG KAQPVTLVEA GPCVVVQVKT EKQDGYEAVQ LGYGKAKHIT SAVKGQCRGF GEFKVLREVD VDDIATVNVG DQITVSDFKD GEKIDASGVS RGRGFAGVVK RWHFAGGPKT HGQSDRHRAP GSISSTTTPG RIYKGKRMAG HMGNDAVTIR NLVVLKTDAE KNLLMVKGAI PGGKNTIILI KKTGK
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