| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_362 |
|---|
| Symbol | |
|---|
| ID | 8657304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 348229 |
|---|
| End bp | 349011 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | amino acid ABC transporter, periplasmic binding protein |
|---|
| Protein accession | YP_003329847 |
|---|
| Protein GI | 270307789 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000000733431 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCT TAAGTACTAT CCTTATGTCC CTGCTCCTGT CCAGCGCATT GCTGTTTTCT
GGCTGCCAAA GCTCTAATGA TGACACCGAC AATACTGATA ACAGCACCAC AAAAATACAG
GTTACTGTAG TAACCGATGC CACTTGGGCT CCTTTTGAGT ATGTTAATGA ACAGACTCAT
GCGATAGAGG GTTTTGATAT AGACCTGATG AAAGCTATTG CCGAAAAGGC CAATTTGGAA
GTCACCTTCC AAAACGTAGC CTGGGACGCT TTGCTAGCAG GTATGGCTAC CGGTCAGTAT
AAAGTAGCTA TTTCCTCAAT CACCATTACT GCTGAACGGG CCGAAAAATG GCTCTTTTCA
GACCCCTATT TCAATGCCGG CCAGATGGTC TGCGTACAGA AAAACAACAC CACTATCCTG
AGCCATAACG ACCTCACCGG TAAAAAGGTT GCAGCCCAGA CCGGAACCAC CGGATTTATA
GAAGCTCAGA AAATAGAGGG AGCTACTGTT AAATCGTATG ATGAAATTGG CCTGGCTTTT
CAGGACCTTA TGAATGGCCA GATTGACGCC GTTATCTGTG ATACCCCCGT TGCCATAGAT
TATGTAAATG CCAACCCTGA CAAAATCAAG AAAGTTGGCA CTGCTTTCAC TGACGAATAC
TACGGCATCT CAGTAGCTAA AGGCCAAACA GAGATTCTGG CCAGGATCAA CCAAGGTCTG
GCAGCCGTCA TAGCCGACGG CACCTTTGAC CAACTGGTAG CCAAGTGGAA CTTAAATCCG
TAA
|
|---|
| Protein sequence | MKRLSTILMS LLLSSALLFS GCQSSNDDTD NTDNSTTKIQ VTVVTDATWA PFEYVNEQTH
AIEGFDIDLM KAIAEKANLE VTFQNVAWDA LLAGMATGQY KVAISSITIT AERAEKWLFS
DPYFNAGQMV CVQKNNTTIL SHNDLTGKKV AAQTGTTGFI EAQKIEGATV KSYDEIGLAF
QDLMNGQIDA VICDTPVAID YVNANPDKIK KVGTAFTDEY YGISVAKGQT EILARINQGL
AAVIADGTFD QLVAKWNLNP
|
|---|
| |