Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_352 |
Symbol | |
ID | 8657294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 340363 |
End bp | 341619 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | polyA polymerase, tRNA nucleotidyltransferase |
Protein accession | YP_003329837 |
Protein GI | 270307779 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCGG AAAAGCTAAG AAGTTTTTTA AAAAACCGCT TGCCGCCGGA AATAAACCGG CTCATTCTGC ATGCGGCTGA ACGGGCAGCC AGTCAAAACC TGTACCTTTA CCTGGCGGGA GGTATGGTAA GGGACTTTCT GCTGGACAAA ACCCCGAAAG ATGCAGATCT GGTTCTGACC GCAAACGCTA TCTTGTTCGG GCAAAACCTT TTTGAGAAAA CTCCATACAA AGTCACCCTG CACCACCGCT TTAATAACCT TTCGGCAGAT ATAAACGGAT TCAAGCTGGA TATTACATCC GCCCGAAGCG AAATTTACCC TGTACCGGGT AAACTGCCGG AAGTGCTTGA AGGCGATATT AGGGCAGATT TATTTCGCCG CGACTTTAAA ATAAATGCTA TGGCCATAAG CCTGAGCCCT CAAGATTTCG GCCACCTTGC AGACCCCTAC AATGGACTTA CAGACCTGAA ACAGGGCAAA CTTAGCGTAC TCCACCCGAA GAGCTTCCAA GATGACCCCA GCCGCATCTG GAGAGCTTTG CGTTATTCGG AGCGCCTTGG TTTTAGTATT TCAGGTGATA CCTTGCCCCT GCTTCTGCGT GATGCACACC TGATACCTCT GATAGGTGCT GACAGATTAT GGTACGAGAT TGAATGTGTT TTCAAGGAAG CCAAACCGGA AAATATACTG CTTAAGGCAG AAGAAACGGG TGTTTTGAGA AACAGCCTGC CGTTTGCAAA GGCTGACAAA TGGCTGGCAG ACAAATTCAC CGAGGCCAGA GAAATATATG GAGAAAACGT GTCTCCTGAA ATATACCTTT GCCTGCTCAC TGCACACATG GACAGCCCCC AGGCAGATTC CTTGATAACC CGCCTGCATC TTGGCAAACA CCTATCCGCC TGCCTGAAGG ATTGCCAGTA TCTGGCAGAA CATCGGGAGG AGCTGGATAT GGCCGCACTT AGCCCCAGCC GTCTGTACAG TCTGCTGGCA AAGTGTAAGA AAGAAGCGTT GCAGGCATTT TATGTTTCTG CAGACAACCC GCTGGTCAGA AAAAACCTGT TGCTTTTCCA CGAAAGACTA TCCGCCGTAA AACCGTATTT AAAAGGGGCT GATCTAATTG CACTGGGATT TGCACCCGGC CCTAATATTA AAACTATACT TACCGAACTG CTGAATCTCA AACTGGACGG CAAGGTTTCC AGCCGGATAG ATGAAATAGA TTATGTAAAA CGGAGACTGG CCGATGACCA AACATAA
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Protein sequence | MNAEKLRSFL KNRLPPEINR LILHAAERAA SQNLYLYLAG GMVRDFLLDK TPKDADLVLT ANAILFGQNL FEKTPYKVTL HHRFNNLSAD INGFKLDITS ARSEIYPVPG KLPEVLEGDI RADLFRRDFK INAMAISLSP QDFGHLADPY NGLTDLKQGK LSVLHPKSFQ DDPSRIWRAL RYSERLGFSI SGDTLPLLLR DAHLIPLIGA DRLWYEIECV FKEAKPENIL LKAEETGVLR NSLPFAKADK WLADKFTEAR EIYGENVSPE IYLCLLTAHM DSPQADSLIT RLHLGKHLSA CLKDCQYLAE HREELDMAAL SPSRLYSLLA KCKKEALQAF YVSADNPLVR KNLLLFHERL SAVKPYLKGA DLIALGFAPG PNIKTILTEL LNLKLDGKVS SRIDEIDYVK RRLADDQT
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