Gene DhcVS_352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_352 
Symbol 
ID8657294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp340363 
End bp341619 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content48% 
IMG OID 
ProductpolyA polymerase, tRNA nucleotidyltransferase 
Protein accessionYP_003329837 
Protein GI270307779 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCGG AAAAGCTAAG AAGTTTTTTA AAAAACCGCT TGCCGCCGGA AATAAACCGG 
CTCATTCTGC ATGCGGCTGA ACGGGCAGCC AGTCAAAACC TGTACCTTTA CCTGGCGGGA
GGTATGGTAA GGGACTTTCT GCTGGACAAA ACCCCGAAAG ATGCAGATCT GGTTCTGACC
GCAAACGCTA TCTTGTTCGG GCAAAACCTT TTTGAGAAAA CTCCATACAA AGTCACCCTG
CACCACCGCT TTAATAACCT TTCGGCAGAT ATAAACGGAT TCAAGCTGGA TATTACATCC
GCCCGAAGCG AAATTTACCC TGTACCGGGT AAACTGCCGG AAGTGCTTGA AGGCGATATT
AGGGCAGATT TATTTCGCCG CGACTTTAAA ATAAATGCTA TGGCCATAAG CCTGAGCCCT
CAAGATTTCG GCCACCTTGC AGACCCCTAC AATGGACTTA CAGACCTGAA ACAGGGCAAA
CTTAGCGTAC TCCACCCGAA GAGCTTCCAA GATGACCCCA GCCGCATCTG GAGAGCTTTG
CGTTATTCGG AGCGCCTTGG TTTTAGTATT TCAGGTGATA CCTTGCCCCT GCTTCTGCGT
GATGCACACC TGATACCTCT GATAGGTGCT GACAGATTAT GGTACGAGAT TGAATGTGTT
TTCAAGGAAG CCAAACCGGA AAATATACTG CTTAAGGCAG AAGAAACGGG TGTTTTGAGA
AACAGCCTGC CGTTTGCAAA GGCTGACAAA TGGCTGGCAG ACAAATTCAC CGAGGCCAGA
GAAATATATG GAGAAAACGT GTCTCCTGAA ATATACCTTT GCCTGCTCAC TGCACACATG
GACAGCCCCC AGGCAGATTC CTTGATAACC CGCCTGCATC TTGGCAAACA CCTATCCGCC
TGCCTGAAGG ATTGCCAGTA TCTGGCAGAA CATCGGGAGG AGCTGGATAT GGCCGCACTT
AGCCCCAGCC GTCTGTACAG TCTGCTGGCA AAGTGTAAGA AAGAAGCGTT GCAGGCATTT
TATGTTTCTG CAGACAACCC GCTGGTCAGA AAAAACCTGT TGCTTTTCCA CGAAAGACTA
TCCGCCGTAA AACCGTATTT AAAAGGGGCT GATCTAATTG CACTGGGATT TGCACCCGGC
CCTAATATTA AAACTATACT TACCGAACTG CTGAATCTCA AACTGGACGG CAAGGTTTCC
AGCCGGATAG ATGAAATAGA TTATGTAAAA CGGAGACTGG CCGATGACCA AACATAA
 
Protein sequence
MNAEKLRSFL KNRLPPEINR LILHAAERAA SQNLYLYLAG GMVRDFLLDK TPKDADLVLT 
ANAILFGQNL FEKTPYKVTL HHRFNNLSAD INGFKLDITS ARSEIYPVPG KLPEVLEGDI
RADLFRRDFK INAMAISLSP QDFGHLADPY NGLTDLKQGK LSVLHPKSFQ DDPSRIWRAL
RYSERLGFSI SGDTLPLLLR DAHLIPLIGA DRLWYEIECV FKEAKPENIL LKAEETGVLR
NSLPFAKADK WLADKFTEAR EIYGENVSPE IYLCLLTAHM DSPQADSLIT RLHLGKHLSA
CLKDCQYLAE HREELDMAAL SPSRLYSLLA KCKKEALQAF YVSADNPLVR KNLLLFHERL
SAVKPYLKGA DLIALGFAPG PNIKTILTEL LNLKLDGKVS SRIDEIDYVK RRLADDQT