Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_291 |
Symbol | |
ID | 8657235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 285831 |
End bp | 287603 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003329780 |
Protein GI | 270307722 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000223386 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACACA AATTTTTACT TCGCGTATTA GGGGTGTTTT CCACCCTGGC CTTGCTGATT GCAGCCTTGC CGCTTGCTCC GGTTTCGGCA GCCACTCTCA CTCTCTCCCC CACTTCCGGC CCGGCCGGTT CACTGGTAAG CGTTACAGGC ACCTCTGTTG CCACGTCAGG TTCACTCGTA TACATTTTGT TCAATGGCGC TAATATAAGT ACTGCCACCG TAGGCAGCAG CGGTGTAGTC AGCGGAAGCT TTACCGTACC CACCAATCTT ACCAGGGGTA CTTACACTGT ATCTTTCCTC TTCACCGGAG GCGACAGTGC CGCATCTCAA ACATTTACCA TTACCCCCAG CATAACTCTG GCTAGCGGCA CCGGTTATGT CGGTGACAGT GTAGCCGTAA CCGGCAGCGG GTTTACCCCC AGTGCCACCG TGAGTTTCTA CCTGGCCGGC ATCACCGCTC CCTTTGCCAC CACTTCTTCA AACAGTAGCG GGGCGATATC CACCACCATT ACCATCCCTG CTGCCAAAAA GGGTACCCTG AGCATAACCG CCAATGACGG CGGCGCAACC GGCAGTGCAC CGGTTAACTT TATTGTCAAC CCCAAGATAA CCCTTTCATC TGCTAATCCC GGTGTAGGTG ACACTATAAC CGTAACCGGC ACCGGTTTTT ACGACGGAGC TGTTCAGATA GCTATAGACT CAGGTACTGC TGTTAATGCC GGCGTATCCG TAGGTTCAAA CGGAAGTTTC ACCGCCACTT ACGAAATACC CGCACTCACC CGCGGTTCAC ACACCCTGAA AGTTAATGAT GCCTGGAATA ACAATGCTCA AGTCACCTTT GATATAGCCC AGAAAATCAC CTTAACTCCC ACCTCCGGCA ATGTGGGCAC CAGCGTTACC GTAAAGGGCA GCGGTTTTAA CACCACCGGC ACCATTACCC TGACCTACTT CGGTCAGAGC GTTACCGTAA CCCTGTCTAG CGGTACTTTT ACCACTACTT TTGTAATACC CGGTGTTCAG GCGGGGGCTT ACACTATCTC CGCCACTGAT GGCAGTGTTA CTTCCACCGC CACCCTGACA GTTACAACCA ATATCACCAT GTCCCCCACC AACAATGCAT CCACCCCCGG AAACGTGGGA CAGGAAATTA CCATAACAGG TTCGGGGCTT AAGGCCAATG ATACCGTACT GGTTACCTTT GACAGTGCCC AAATTACTGT AACTCCCAGT CCCGTGGTTG ATTCCAACGG GGATTTCAGC CTGAAATTTA AAATCCCCGC CGCCACTGCC GGACCTCACA CCATTACCGT TATCTCCGGC ACTACCAGTA AGACCTTCAC TTTCTTTGTT GAAGGTACTG CTCCGGCCAC TCCCGCCCCT CTTACCCCAG AAATGGGGCT TAAAGCTAAA CAACCCGTTG TTTTTGACTG GGAAGATGTA ACTGATCCCA GCGGTGTTAC CTATGTACTG GAAATTGCCG CTGATCAGAA CTTTACCACT ATCCTTTATC AGATAAAGGA TCTCACCGAA TCCACCTACA CCATGACCGA TGCTCAAAAA CTGGAAAGCG TTTCTTCAGA CAGCCCCTAC TGGTGGAGAG TCAAAGCTGT TGACGGTGCT GGAAACTCAA GTGCATATAC TGGCGCCGGC AATTTCACCG TCGGCTTCAG CTTGGACCTT CCCGCTTGGG CCACCTATGT CCTGATAGGT ATCGGTGGTC TCTTGCTGCT GGCTTTGGGC TTCTGGCTCG GCCGCCGCAA CGCTGACTAC TAA
|
Protein sequence | MKHKFLLRVL GVFSTLALLI AALPLAPVSA ATLTLSPTSG PAGSLVSVTG TSVATSGSLV YILFNGANIS TATVGSSGVV SGSFTVPTNL TRGTYTVSFL FTGGDSAASQ TFTITPSITL ASGTGYVGDS VAVTGSGFTP SATVSFYLAG ITAPFATTSS NSSGAISTTI TIPAAKKGTL SITANDGGAT GSAPVNFIVN PKITLSSANP GVGDTITVTG TGFYDGAVQI AIDSGTAVNA GVSVGSNGSF TATYEIPALT RGSHTLKVND AWNNNAQVTF DIAQKITLTP TSGNVGTSVT VKGSGFNTTG TITLTYFGQS VTVTLSSGTF TTTFVIPGVQ AGAYTISATD GSVTSTATLT VTTNITMSPT NNASTPGNVG QEITITGSGL KANDTVLVTF DSAQITVTPS PVVDSNGDFS LKFKIPAATA GPHTITVISG TTSKTFTFFV EGTAPATPAP LTPEMGLKAK QPVVFDWEDV TDPSGVTYVL EIAADQNFTT ILYQIKDLTE STYTMTDAQK LESVSSDSPY WWRVKAVDGA GNSSAYTGAG NFTVGFSLDL PAWATYVLIG IGGLLLLALG FWLGRRNADY
|
| |