Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_273 |
Symbol | |
ID | 8657217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 265857 |
End bp | 266792 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | cation efflux protein |
Protein accession | YP_003329762 |
Protein GI | 270307704 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.02572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTACTA GAAAAACCAG GGCGGCTTCA TTTTCGATAG CTTCCAACTC AACGCTTATA GTTATGAAGA CAGTGGTCGG TTTTATTACC GGCTCCGTGA GTATTTTGGC AGAAGCTATT CACAGTACTC TTGACCTGGT AGCCGCAGTT ATTGCTTTTT TTGGTGTCAG GGCCTCTGAC AAGCCGGCAG ATATTAACCA TCCTTACGGA CATGGCAAAT GGGAAAATGT AAGCGGCACA GTAGAGGCCG TGCTTATCTT TATAGCCGCT ATATGGATTA TTTACGAAGC AGTAAACAGA CTTATAGAAG GCTCTGCCCC GGAAATGCTG GAATGGGGTG TGGTAATCAT GGGAATATCC GTAATTGCCA ACACCCTGGT TTCGCGCTAT CTGAAAAAGA TAGCCCGCGA GACTGATTCA GTTGCTCTGG AGGCAGATGC CGCCCACCTT ACCACCGACG TAATCACCTC AGCCGGAGTA CTTCTGGGTC TTATACTGGT AAAACTGACC GGTTGGAGCA TACTTGACCC CATCGTAGCC TTGCTGGTGG CACTGCTCAT CATCAAAGCC GCCTGGGATA TCCTCAACAA ATCTTTCGGG GCACTGGTGG ATGCCCGCCT GCCTAAAGAA GAGTTAGATG CTATCACCTC ACTGATAAAT GAACATACCT CAAAGCTGGT AGAGTTTCAT AACCTGCGTA CCCGCAAAGC CGGCAGTTAC CGGTATGTAG ACCTGCATCT GGTTATGCCC AAAACGCTTT CAGTGGAAAA ATCTCACGCC ATATGTGACC ATTTGGAAAA AGACTTGAAA GATAAACTAA AAATAGACTA CGTAACTATA CACGTAGAAC CATGCACCGA GGAAAACTGC CCGGAATGCC AGATGAGCTG TAAGAAACGT CCGTCAGATT TAGCTAATCC CGCAAATACT CCGTAA
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Protein sequence | MATRKTRAAS FSIASNSTLI VMKTVVGFIT GSVSILAEAI HSTLDLVAAV IAFFGVRASD KPADINHPYG HGKWENVSGT VEAVLIFIAA IWIIYEAVNR LIEGSAPEML EWGVVIMGIS VIANTLVSRY LKKIARETDS VALEADAAHL TTDVITSAGV LLGLILVKLT GWSILDPIVA LLVALLIIKA AWDILNKSFG ALVDARLPKE ELDAITSLIN EHTSKLVEFH NLRTRKAGSY RYVDLHLVMP KTLSVEKSHA ICDHLEKDLK DKLKIDYVTI HVEPCTEENC PECQMSCKKR PSDLANPANT P
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