| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_256 |
|---|
| Symbol | uvrD |
|---|
| ID | 8657200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 240106 |
|---|
| End bp | 243024 |
|---|
| Gene Length | 2919 bp |
|---|
| Protein Length | 972 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_003329746 |
|---|
| Protein GI | 270307688 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000753871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAACA TAGACCAGGT CTTGAGAAAC GAATTAACAC CGCAACAATA CAATGCCGCC
GTCGACACCG CGCGGGAAGT GTTGTGTCTG GCATGTGCCG GCTCGGGCAA GTCCAGGACG
CTGGCGTACC GCATTGCCAG ACTTCTCGCC GAAGGTGAAC CACCTGAGGG GATTGTGGCC
TTCACGTTCA CCGAAAAAGC GTCGGAATCC ATCAAGCGCC GCGTTTCTCA GGCGTTGACT
ACCGCTGGAC TTGATGCCAC TGTTATGGGA GCAATGTACA TCGGCACCAT TCACAGTTAT
TGCCAGCACA TTCTGGGTGA TATTGACGCC AAATATAGAC AATACGATGT TCTTGATGAC
AATCGCCTGA AGCTATATTT GATTTCGCGG TACTACCAAC TGGGATTGCA GGGATTCCGT
CCTCGTGCGC AAAACAACAG TTATTTCGAT ACAATTAAGC AGGCATCAGA AGCGTGGAAG
ACCACTAATG ACGAGTTATT AGATTTCAAT GCAGTCGCAG CCGAAGACCA GGACGTTGGT
GATTTGTTAA TACGCATCCG GAGTGGGTTA CGAGAAGATC AATATATTGA TTTCTCCCTA
ATGATTCGTG ATGTAGTCGA CTCTATTCGA GCCAACGTAC CCGGACTGGA AAACGGTATT
GGAAATTTGC GACATATCAT GGTGGATGAA TATCAAGACG TCAATCCGTG TCAAGAGGAA
TTGGTCCGGT TGCTTCACCA ACGTTCTCAA ACGCTCTTTG TAGTCGGGGA CGACGACCAA
TCGATCTATG CATGGCGCGG CGCCGACGTC AGTAACATTT TGGGGTTTCA GGGAAGATAT
CGTAACAGCA CCGTACACAC GTTGTCCCAG AACTTCCGCA GCACAGCACC CATAGTACAA
GCGTCGGACT CTTTCGCTGC AGTGTTGTTA GGTCCAAGTC GAATTGCGAA GAATCCTGCT
GCTTCTACAA ATTTAATACC TCAGGATTTA AGGGTGCTGT GGTTTCCTGA CCGTTCTACA
GAGGCTGGCT GGGTTGCCGC AAGAATACGA GATCTTCTCG GAACGGCTTA CAATGATAAC
GGAAATATTC GCGGTTTGAC ACCTGCGGAT TTCGCGGTCT TGATGCGCTC CACCCGGCAG
GCGGAACAGG ACGGAGTTCC AAGGCACACA GCTTTCACCA CTGCCTTGGA GAATCTTCGT
ATTCCGTTCA GTCTGGAAGC TGGCGGTGGA CCATTTGATC GTCCGCAGAC AGCGGTTCTG
CGCAGTACCT TTGAACTTCT TCGTAATGTC CCACTTGATC GGAACGCAGT TCAACAACAT
TTCAACAATG AGGTAATACT GGCGTATCCT GACGCTGACT TCACCGCTCT CGCTCGAGTT
CTGACCGACT GGAGTCGCCG GATCCACCGC CCCCAAGGTT CCTCGAGAAT CCGACTTCGT
CCTCAGCAGC TTGTGTATGA TCTACTAGAA GCTTTCAACA TTGCTCAGAC CAACTTTGGC
GATGACATTA TGCGGGATAT CGGGCTCTTC AGCCGCATGA TCATGGATGT TGAGACTGTA
TATATGAGTG TAGATTCAAG ACAGCGTTTC TCCGAAGTGC TTAACTTCTT GCAGAATGCC
GCCGAAACCG GATATGACGT ATCCACGGAT GATGTGCTCC AAAGACCGGA TGCAGTCACG
GTGTCGACTG TTCACAAGAT GAAGGGACTC GAGTTCCCAT GTGTGTTCAT AGTTGATGTG
GAGGCTCACA GGTTTCCCAA ACGGAGGAGC AGCTATTCAG GCTGGTTACC GCCGGGTGTC
ATGACGAGCG CGATTAATCG CGGCGCTTAC CAGAGTACTC CCGATGAGGA AATAAGGCTC
TTTTACACGG CAGCTACACG GGCTGAACGA TACCTTCACG TTAGCGGGGC GGAGAACCTA
CCACAGGCAA GGCGACCAGC ACGTCGATCT CCGTATGCTC TACAGCTTGC CACTCATCCA
GCGGTGGTTC AAAACGCTGG CGGTTTGCCA CCGGGGATTG TTCAAGCCAC GCCCCGCCGG
AGAGTTGAGG ATGCCGATTA CCCAACAAGC TTTACTGAAA TCAAGTATTA CTTGCAATGT
CCGAGGGGCT ACCAATTAAG GCAACGCTAT GGATTAAATC CAGTGATCCC GGAAATGTTT
GGTTATGGGC AAACAGTACA TACATCAATT CAGAAACTTC ATGAGCTTTA CCCGAACACA
CCGCCTTCTC AAGACCAGGT GGAACAGGTG GTTTTCGATA CATTCCACTT AAAGCATGTT
CCCCAAAGCG GAGACCCGGT GAATCGTCCT GGTGCTTACG AAAACTCAAG AAACCGTGCT
GTGGAAATCG CCGAGGATTA CGTAGCATCT TTCGGTGCAG ACTTTGAGCG GGAGCGACAA
GTAGAAGCAG TTTTCGAAAT TCCGACTTCC AACTGTGTTA TCTCCGGCTC CATTGATCTT
CTACTTCACG AAGATGAGCA TGGGGAAATC CTCCATGCAG AGATCATTGA CTTCAAGACA
ATGGAAGGAG GAGAAGCTCC AGCAGAGAAT GACGATCTTG ATTGGACCGA ACTCGCTTTA
CAGGTTCAGT TGTATGCTAG AGCGGCTGAT CAAGTGATGG GTCAGAACAC GAGGACGGGC
AGTGTTCATC TTCTAAAAGA TAACCAACGA ATCGAGGTGC CTATCACCCA AGAAGCGGTG
AATGCAGCAC TTTCCAATAT AGAATGGGCT GTAACCGGCA TTCTAGGTTC GGACTTCCCC
ATGCGACCGC ACCCTGAGAA ATGCGGGAAG TGCGATTTTA AGGCGATTTG CCAGGCTACA
CCTCAGAATT TCAGCGTCCA GACAACTGTC CCACCGGAAC TGCACTTACC TGGCCGCAGA
GAAATGGCTC GGGCTTTCAG CCTCTATCGA GGGACTTGA
|
|---|
| Protein sequence | MMNIDQVLRN ELTPQQYNAA VDTAREVLCL ACAGSGKSRT LAYRIARLLA EGEPPEGIVA
FTFTEKASES IKRRVSQALT TAGLDATVMG AMYIGTIHSY CQHILGDIDA KYRQYDVLDD
NRLKLYLISR YYQLGLQGFR PRAQNNSYFD TIKQASEAWK TTNDELLDFN AVAAEDQDVG
DLLIRIRSGL REDQYIDFSL MIRDVVDSIR ANVPGLENGI GNLRHIMVDE YQDVNPCQEE
LVRLLHQRSQ TLFVVGDDDQ SIYAWRGADV SNILGFQGRY RNSTVHTLSQ NFRSTAPIVQ
ASDSFAAVLL GPSRIAKNPA ASTNLIPQDL RVLWFPDRST EAGWVAARIR DLLGTAYNDN
GNIRGLTPAD FAVLMRSTRQ AEQDGVPRHT AFTTALENLR IPFSLEAGGG PFDRPQTAVL
RSTFELLRNV PLDRNAVQQH FNNEVILAYP DADFTALARV LTDWSRRIHR PQGSSRIRLR
PQQLVYDLLE AFNIAQTNFG DDIMRDIGLF SRMIMDVETV YMSVDSRQRF SEVLNFLQNA
AETGYDVSTD DVLQRPDAVT VSTVHKMKGL EFPCVFIVDV EAHRFPKRRS SYSGWLPPGV
MTSAINRGAY QSTPDEEIRL FYTAATRAER YLHVSGAENL PQARRPARRS PYALQLATHP
AVVQNAGGLP PGIVQATPRR RVEDADYPTS FTEIKYYLQC PRGYQLRQRY GLNPVIPEMF
GYGQTVHTSI QKLHELYPNT PPSQDQVEQV VFDTFHLKHV PQSGDPVNRP GAYENSRNRA
VEIAEDYVAS FGADFERERQ VEAVFEIPTS NCVISGSIDL LLHEDEHGEI LHAEIIDFKT
MEGGEAPAEN DDLDWTELAL QVQLYARAAD QVMGQNTRTG SVHLLKDNQR IEVPITQEAV
NAALSNIEWA VTGILGSDFP MRPHPEKCGK CDFKAICQAT PQNFSVQTTV PPELHLPGRR
EMARAFSLYR GT
|
|---|
| |