| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_235 |
|---|
| Symbol | |
|---|
| ID | 8657179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 224017 |
|---|
| End bp | 225273 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | subtilisin-like serine protease precursor |
|---|
| Protein accession | YP_003329725 |
|---|
| Protein GI | 270307667 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATATG CAGTGATATC GAAAGGAATC AGTCCGGTAC AGCTCGAAAC TGAGGTGAAG
AAGGTTGGCG CCGGAAACAT AGTTAAGACA AAGCTTGTGG GACAGCTCTT CTGCGAACTG
GATAATGACC AGGCCAGGAT ACTTGCCAAA GTCCCTGGAC TGATCCTCAA AGAGATCAAG
GAGTACAAAA CCCAGCAAGT GCTAGCTCAG GCTCCGGCCG CGGAGTCTAT TTCTGACGTC
TTCTACCTGC TGCGCTCATA CTTCAACCCG CCGCTTACCG GTACGGGGCT TACCGTTGCA
ATGCTGGATA GCGGTATTCG CAAAACACAC GAAGCGCTGC AGAACAAAGT GGTATTCGAG
GTAAACCTGA CCGACTCTCC CTCCGCTACC GATGTCTTTG GGCACGGCAC CCAGGTAGCC
TTTGTCATCG CCGGTGGTCT CCATGCCATG GGCAGTAAAG CCGGTGTTTC GCCGGGTGCG
ATCCTGATGA ACATCAAGGT CATAAGCGAT GAAGGCATCG GTAACGACGA GGATATCGTT
CTGGGCATCG ATAAAGTCTG CGAGCTGGCC GAGGACGCCA GGAAGAAAGG ACTATGGCCC
ACGGACGATA TGTACCCGAA TGTTATAAAC CTCAGCCTTG GCGCAGAGGA TGATGGCGAC
CCGGATAATC CGGTGAGAGC CGCCTGCCGT AAAGCCAGTA CCGAATACGG GCTGGACGTC
GTTGCCGCGG CCGGCAACTC AGGTCCCGAT ATGACCACTA TTATGCTTCC TGCCTGTGAC
CCTGAAGTGG TGGCAGTCGG AGCCCTCGAA ACCATTGGTG ATCTCGTTAT CTGGGAGAAG
TCATCGCGAG GGCCGACTGT TCAGGGTGAA ACAAAACCTG ATTTCGTCAT CTGGGGCACA
AGCCTCGAGA TGGCTAGTGA AAAAGCTGAC GATGAATACG TCGTCAAATC GGGAACGAGC
TTTGCCGCTC CGATGCTTTC CGGACTAACC GGCTTGCTCT GGGAAAGTGG CCGGAGGGCG
TATGGGGAAA GCTGGCTGTT CCGCTGGACA GATGCCCGGC AGTTTGGTCC CTATTTTTCA
ACCAAACCGG CGGATGCTCC CCTGAACAAA GATAACGCTT ACGGTTATGG TCTCCCGGCT
ATGGGAACGA TGCTGGGCGA AGTGGCCCAG GTAAGTACAC CAAGCCAGGG AGTAAACGAT
ATGTTCCCGA TGGTAATGAT GATGGCGATG ATGTCCGCTC TGACAGGAGG TTTTTAA
|
|---|
| Protein sequence | MRYAVISKGI SPVQLETEVK KVGAGNIVKT KLVGQLFCEL DNDQARILAK VPGLILKEIK
EYKTQQVLAQ APAAESISDV FYLLRSYFNP PLTGTGLTVA MLDSGIRKTH EALQNKVVFE
VNLTDSPSAT DVFGHGTQVA FVIAGGLHAM GSKAGVSPGA ILMNIKVISD EGIGNDEDIV
LGIDKVCELA EDARKKGLWP TDDMYPNVIN LSLGAEDDGD PDNPVRAACR KASTEYGLDV
VAAAGNSGPD MTTIMLPACD PEVVAVGALE TIGDLVIWEK SSRGPTVQGE TKPDFVIWGT
SLEMASEKAD DEYVVKSGTS FAAPMLSGLT GLLWESGRRA YGESWLFRWT DARQFGPYFS
TKPADAPLNK DNAYGYGLPA MGTMLGEVAQ VSTPSQGVND MFPMVMMMAM MSALTGGF
|
|---|
| |