Gene DhcVS_220 details

Gene Information

• Locus tag: DhcVS_220
• ID: 8657164
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 212238
• End bp: 214421
• Gene Length: 2184 bp
• Protein Length: 727 aa
• Translation table: 11
• GC content: 54%
• Product: hypothetical protein
• Protein accession: YP_003329710
• Protein GI: 270307652

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGAACG AAAATGCCGC CGTACCCATG TCTTCAGATG CCGTCCAGGA TCTCACGGCG 
GAGCATCTTT GCCATCTGCA GGAAGGAAGC GGAATAAAAG CCGAGGTCAT CAAGGAGAGA 
GGCTATCGCA GCATCTTAAA TAAGAGCGAG CTGGAGAAGC ATGGTTTCTT ATCTTCACAG 
CGGCGGGCGC CGGGAATTCT CATACCGCTA TGGGGAGTAG ACGGAGGCCA AGTCGGATAC 
CAGTACCGGC CGGACAATCC TCGGTCGGAC TCAAGGCAGC GACCGGTAAA ATATGAGTCT 
CCGGTCGGGT CCTCGAATCA CCTGGATTGT CCACCGCGCT GCCGGCCATT GCTGGGAGAT 
CCCAAGACAC CTCTATGGAT CACAGAAGGC TCCAAGAAAG CCGATGCCCT GGCTTCACAC 
GGTGCCTGCG TGATTTGCCT CACAGGCGTC TGGGGCTTCA AGGGTAAAAA TGAGTTCGGC 
GCCGTAACCC TGCTTGCAGA TTGGGACCGT ATCGCCATCA AAGATAGGCT GGTATACCTG 
GCATTCGACT CGGATGTGAT TTCCAAGGAT ATGGTCAGGA AAGCTCTGGA GCATTTGGGA 
GAGCATCTGT CACGCAAGGG AGCCAACATC CTGGTTGTCT ATCTCCCACA GGAAGGCAAC 
CAGAAATGCG GCATTGATGA TTACCTGCTC AATCACTCTC TGGAAGATGC ACGCAAACTG 
GCCACCGACT TCAGACCTGC TGACGAGCAA AGCCGGGAGC GGTTTGTGCC GGGTTTTGTC 
CTGCACGACG GCACCATCGG TGAGCTTATT GTAAGTCCGG AAGACGAGAG GGCTTTTATC 
ATCATAGTTA ACGGCTCGGT GCGTAAAGTT TTCCGTTATG AGACGCCGAA AGCTATCTAC 
CTGCCTTCCG ATGATCCGCT GGTAACGGAG GTTGTTCACT TCGCCAGTAC CGCCACACCT 
TATGAATCAC AGGCCAGGCT TTTCAGCGAG ATCAAAGGCT TTATTCATCG CTATCTGGAA 
ATACCGCCCG ACTTCGAGGA AATCTCAGCA CTCTATGTGT TGCTGACCTG GGTCTACGAG 
TTTGCCCCTT CAATTCCTTA TTTAAGAGTT ATCGGTGACT GGGGTACCGG CAAGACAAGG 
TTTCTCCAGG TGGTAGGCAG TGTCTGTTTC CGACCGACAT TCGCTTCGGG AGCAACCACG 
CCGGCGCCCA TCTTTCGTGT CCTGGAACAA TTCCGGGGGA CGCTGGTCCT CGATGAAGCA 
GACTTCAAGG ATTCCTCGTC ATGGGTGGAG ATGGTCAAGC TCCTCAACAA CGGCTACCGG 
CCGGGAATGC CGGTGCTCAG GGCAGACAAA GAAAACGGCA AGTGGTTCCC GCGAAGCTAC 
CAAGTATTCG GTCCAAAACT TATCGCCACC CGCTTCCCTT TCCAGGACGA GGCTTTAGAG 
AGCAGATGTT TAACTTCGGA AATGATGCCG CTCACCCGGG ACGATATTCC CCGGGTGTTG 
CCGCCGGCTT TCGAGAAAGA GATAGACGAT CTCAGAGCCA AGCTCCTGAC TTTCCGGTTG 
GCTAACCTTA TCAAGCTCAA GGGAAAGACT TTCGGCAACG AGCTTCTGGA ACCGAATCTC 
CAACCAAGGT TGCAGGAGAT ATTGATCCCG CTCAAAGCCA TGCTCAACGG TGATCATTCC 
ATGGTCGAGG CCATAACCGG CTTCGTGCAC CGTCTCCAGG AGAATCTTTT CCTGAGAAGA 
AGAGAAAGTG CTACTGGCAG GGTGCTGGCT GCTTTGATAG AACTGCATGA GGAAGGCAAG 
GAGCTTACAT CAGATGCCGT GGCCAAGAAG GCGAATGAAA CTGACGACGA GGTGGAGCAG 
CTCAGCGCCG AAAAGGTCGG CAGGCTCACC AAGAAGCTGG GGTTTGCCAA GGAACGGATG 
GGTAAGTCTC GCCAGAGACT TATCTGCTGG GACGAGACGA GGGTTACCAA GATTGTGTCG 
TCATATGGCC TTCAGATGGC ATTGCCATTA TCCCCGGAAA AACCGTCCGA ACCGTCCGTA 
CTGTCCGCTT TAGCTTCAAA TCCGGCGGAC AGTAATAAAG AAGGCCTTAA ATACTGTCCG 
CCATACTGTC CGCCAAAAAC TGAAGCTGAC ACAAGCGTGG GGGCGGACAG TAGGACAGAG 
CGGACAGTAA CTGACAAGGA ATGA 

 

Protein sequence

MQNENAAVPM SSDAVQDLTA EHLCHLQEGS GIKAEVIKER GYRSILNKSE LEKHGFLSSQ 
RRAPGILIPL WGVDGGQVGY QYRPDNPRSD SRQRPVKYES PVGSSNHLDC PPRCRPLLGD 
PKTPLWITEG SKKADALASH GACVICLTGV WGFKGKNEFG AVTLLADWDR IAIKDRLVYL 
AFDSDVISKD MVRKALEHLG EHLSRKGANI LVVYLPQEGN QKCGIDDYLL NHSLEDARKL 
ATDFRPADEQ SRERFVPGFV LHDGTIGELI VSPEDERAFI IIVNGSVRKV FRYETPKAIY 
LPSDDPLVTE VVHFASTATP YESQARLFSE IKGFIHRYLE IPPDFEEISA LYVLLTWVYE 
FAPSIPYLRV IGDWGTGKTR FLQVVGSVCF RPTFASGATT PAPIFRVLEQ FRGTLVLDEA 
DFKDSSSWVE MVKLLNNGYR PGMPVLRADK ENGKWFPRSY QVFGPKLIAT RFPFQDEALE 
SRCLTSEMMP LTRDDIPRVL PPAFEKEIDD LRAKLLTFRL ANLIKLKGKT FGNELLEPNL 
QPRLQEILIP LKAMLNGDHS MVEAITGFVH RLQENLFLRR RESATGRVLA ALIELHEEGK 
ELTSDAVAKK ANETDDEVEQ LSAEKVGRLT KKLGFAKERM GKSRQRLICW DETRVTKIVS 
SYGLQMALPL SPEKPSEPSV LSALASNPAD SNKEGLKYCP PYCPPKTEAD TSVGADSRTE 
RTVTDKE