Gene DhcVS_200 details

Gene Information

• Locus tag: DhcVS_200
• ID: 8657153
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: -
• Start bp: 199292
• End bp: 201283
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 51%
• Product: ABC transporter, ATP-binding protein
• Protein accession: YP_003329699
• Protein GI: 270307641

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTAAATA TCCAAAATCT TTCCAAATCC TTCGGGGTAC GCAGCCTTTA CACCGGCGTA 
AACCTGAATA TAGGTGCAAG AGACCGTCTG GCTCTGCTTG GGCCAAACGG CAGCGGCAAG 
ACCACCCTTT TTGAAATGAT TGCCGGCAGG CTGGAAGCTG ACGAAGGTAA AATTATCCTC 
CGCCGCGGCA CTACGGTGGG TTATCTGGAA CAGGATATCA AGCCCAGCTC CAAACAGCCC 
CTTCTTAAAG CTGTCTCCAG TGCCTCTGAC CGCCTTAGCT CCCTTTCGCA CAAAATTTCC 
TTGCTTCAGG GGGAACTGGC CGAGGAAAAA GACGGCTCTG AAAATAACCG CCTTCTGAGC 
GAACTGGGGG AGCTTCAGCA CTCATTTGAG GCTCTGGGTG GTTATAATGC CGAACAGGAA 
GCCAAGCTGA TACTGGCCGG GCTGGGTTTC AAACCGGCAG ATTTTGACCG CCCCCTGCAT 
GAGTTTTCCG GCGGCTGGCT GATGCGGGCT GAACTGGCCA AACTCCTTTT CCTCAGCCCG 
GATATACTCA TACTGGACGA ACCTACCAAT CACCTTGACT TAGAGTCCAC CCGCTGGTTT 
GAAAGCTACC TAAAGCAGTA TAGCGGCTCG GTGCTTTTTA CCAGCCATGA CCGGGCATTT 
TTAAACTCCA TCGCTACCAA GATACTGTCA CTGGAAGACC AAAAAGCCCG CCTTTATTCC 
GGTAATTATG ACAGCTACCT GCGGGAACGC GAACTCCGCC TGAACCAGCT GGAAAGCCAG 
GCCCGCCGCC AGCAGGAACT TATTGATAAA GAAACCAAGT TTATAGAGCG CTTCCGTTAC 
AAAGCCACCA AAGCCAGCCA GGTGCAAAGC CGGATAAAAA AGCTGGATAA GCTGTCTGCG 
GTAGCTATCC CTCGCCAGAC CAAAAAAATA CACTTTAATT TCCCCGAACC AGAACGCAGC 
GGGCATGATG TTATAAAACT AAGAAACCTC ACCAAGTCTT ACGGTGACCT GGTTATCTAC 
CAGGGGCTGG AACTGGTGCT TGCCCGGGGT GACAAGGCCG CTCTGGTAGG CCCTAACGGT 
GCCGGCAAAA CCACCCTCCT TAAGATACTG GCCGGGGTTA TGCCATTTGA TTCGGGTTAC 
CGTAATCTGG GAGCAAACGT AAACACCGCC TATTTTGCCC AGTATTATGT AGAGTCGCTA 
ATCCCTGCCA ATAACCTGAT AGAGGAGCTG GAAACGGTTT TACCCGACGC CCCCGAACAG 
CAGCTGCGTG GTATGCTGGG GGCATTTCTC TTCAGCGGGG ATGATGTAAA AAAGAGGATA 
TCGGTACTGT CCGGGGGTGA AAAAACCCGC TTGGCCATTG CCAAAATGCT GCTTAAGCCC 
GCCAATCTGG TACTCATGGA CGAACCCACC AATCATCTGG ACATACCCGC CCGCGAAATA 
CTGGCAGACG CCCTTCAGGC ATACAAAGGC ACTCTGTGTT TTATCACCCA TGACCGCACC 
CTTATCCGCG AAGTAGCTAA CAAGATTATT GAAGTACGTA ACGGCAAAAT CAGGGTTTTT 
GAAGGCGATT ATGATGCCTA TCTGAAATTT GCCGCCGCCA ACCCTTTTGA AGGGGAAGCA 
CCCAAAAGCC CTGCACCGGT TATTTCTCAC CGCCCTGCCC CCGTTCCGGC CGCACTCTCC 
CAGAAACAGC GCAAAACTCT GGAAGGGCAG ATAAGAAACC AGCATTATAA AGAAACCGGG 
GCTTTGAAGA AGGAAATATC TGACACAGAG GCTGAAATAA CAAACTTGGA ACAACGCAAA 
CAGGAACTGG AAACCCTGCT TGCCGACCCT GATTTATACC GCAGCGGCCA AAAAGCGGCC 
GATACATCAG CGGAATATAA AAACTGCAAG GAGCAGCTGG TCACTCTGGG TGATAAATGG 
CTAAAACTCT GCCAGCAGAA CGATGCCCTC AAACAGAAAC TGGAAGATAC CCTTAAGGCA 
CTGTATAATT AG 

 

Protein sequence

MLNIQNLSKS FGVRSLYTGV NLNIGARDRL ALLGPNGSGK TTLFEMIAGR LEADEGKIIL 
RRGTTVGYLE QDIKPSSKQP LLKAVSSASD RLSSLSHKIS LLQGELAEEK DGSENNRLLS 
ELGELQHSFE ALGGYNAEQE AKLILAGLGF KPADFDRPLH EFSGGWLMRA ELAKLLFLSP 
DILILDEPTN HLDLESTRWF ESYLKQYSGS VLFTSHDRAF LNSIATKILS LEDQKARLYS 
GNYDSYLRER ELRLNQLESQ ARRQQELIDK ETKFIERFRY KATKASQVQS RIKKLDKLSA 
VAIPRQTKKI HFNFPEPERS GHDVIKLRNL TKSYGDLVIY QGLELVLARG DKAALVGPNG 
AGKTTLLKIL AGVMPFDSGY RNLGANVNTA YFAQYYVESL IPANNLIEEL ETVLPDAPEQ 
QLRGMLGAFL FSGDDVKKRI SVLSGGEKTR LAIAKMLLKP ANLVLMDEPT NHLDIPAREI 
LADALQAYKG TLCFITHDRT LIREVANKII EVRNGKIRVF EGDYDAYLKF AAANPFEGEA 
PKSPAPVISH RPAPVPAALS QKQRKTLEGQ IRNQHYKETG ALKKEISDTE AEITNLEQRK 
QELETLLADP DLYRSGQKAA DTSAEYKNCK EQLVTLGDKW LKLCQQNDAL KQKLEDTLKA 
LYN