| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1400 |
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| Symbol | rdhR |
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| ID | 8658325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 1297427 |
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| End bp | 1297942 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | |
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| Product | transcriptional regulator, MarR family |
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| Protein accession | YP_003330827 |
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| Protein GI | 270308769 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00128815 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAAGCA ACAATACTTT TGAGATTTGG TCTATGCTGA TGCAGGCAAG GGCAGGCGCT
TATAATGTCC GCCGCAAAGA GCTGCTTGAT ACAGGAATTA CACCTGAACA GGCAGGTATA
CTGAATATTT TGCATGTGGG AAGAGATACC GTAGTAACTC CCGCCAAAAT TTCCAAAATA
TTTTTACGCG AACCCCATAC CGTCTCGGTA ACCCTAAAGG GAATGGAAGC CAAAGGGCTG
CTGGAACTAA GAAAAGACCT GGAAAGACGG AATATGATTC GGGTAGTGAT AACGGAAGCA
GGGGAGAACG CCAGAAACGC TGCGTTTTTA CTGCCGAAAG TCCAGAAAAT ATTTGAGGAT
TTTTCTGACG AGGAAATAGA CCAGCTTAAG GGTTTGCTCC AAAGAGTACG GGATAAATCT
ATAATCGAGC TTTCTACCCC AAAAATTAAA ACCGGTTATG ACTTGAACAT ACTTCACAGT
TACGACACCG AAATATCGTA TAAAAACAAA CCCTGA
|
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| Protein sequence | MPSNNTFEIW SMLMQARAGA YNVRRKELLD TGITPEQAGI LNILHVGRDT VVTPAKISKI
FLREPHTVSV TLKGMEAKGL LELRKDLERR NMIRVVITEA GENARNAAFL LPKVQKIFED
FSDEEIDQLK GLLQRVRDKS IIELSTPKIK TGYDLNILHS YDTEISYKNK P
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