Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1347 |
Symbol | rdhA |
ID | 8658272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 1246808 |
End bp | 1248097 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | reductive dehalogenase |
Protein accession | YP_003330774 |
Protein GI | 270308716 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGAC GAACCCATAG CACAATTTTA TCTCAACGGT TACTTAAGAG ATTCAATTTT GAAGATATGG TAACCAACAC GAGAATATAC AGAGATCTTG ATGAATTAAA ATCAAGTGAT TTGGCAATTG AAAAACTACC ATGGTGGATA ACGCATAAGG ACTTTTGGGA TTTTACGACT GAGATCGATT GGTCAATCCA AAAACCTTTC ATGCATACTC CTCAGAATTA CTACCAGCAT TTAACTCCTG AACAAATTAC ACAATATAAT TCTCGCCTTA CTGAAGTAAT GGAATGGAAA AAGACTTCGA AAGTTTTAGG TTTTACTCAT AGGGATTATG CTATGAAACG CGGCGCGGAT ATTACCTCTT TACTTCCGAA TTTAGCTGGC ATTGATGAGA ATGGTAAAAG TGTACTGTAT TGGACTGGAT CCCCTAAATT AATGGATACA ATCCCAACTC CTGAAGACAT GGGTTGCCCA AAATATGAAG GAACGCCGGA AGAAAATCTT CGAATGATAA AAGCTTTTTT AAAGATTTGC GGTGCTTCAA AAGTAAGAGC TGTCCCGATA GATGCAAAAT TCAAATCAGT TCAACCAAAA TTCTACGCAC CAAATGTACC TTTAGTTTAT GAATCTGTGG ATAAACCTTA CAGTACAGAA AATAAACGTG TCATTCCTCA AAAAATGCAA TGGGCAATTG TTTTTTCAAC ACAGGGCGGT AATAATCTCA CGGCACAAGG TAATAATTGG ATTGGAAGTC TCGGTGCTGC AATTTACAGC GGTGGTCCAA GTGATTTCAT ACAAATACAA GCCCAACGCT TTTTAAAAAT ACTAGGATAT AATAGCATTG TAAGCGGCAT CAGTTATAAC CTGCAAAGTT GGCCGGCAAT GGGTGTTGCA TCAGGTATGG GAGAATTGGG ACGTATTCAG ATAAGCATAT CACCTTTTTT CAACTGCGAT CGAGCTATTC GCTGTATTAT CACTGATCTT CCAGTATCGC TTTCCCAGCC AATTGATGCC GGTATAACTC GCTTCTGTAT CAAATGCGGT ATCTGCGCGA ATATATGCCC GGTATCAGCA ATTAATTCTA ATCCTGAACC TTCTTGGGAT ATTTGGTCAA GCGATCCTTC CAACCCAAAT CTTAAGCCAG AGTTGTTTAA TAATCCAGGT AAAAAGACAT GGTATCTTGG GCACCATCTA TGCTCGATTT TTGGGCGTGA TGCTAATGAT AGCAAATGCG GCCTCTGCAT GATTAATTGC ACTTTCCATA AAAGTAACAA TCAGGTTTAA
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Protein sequence | MMRRTHSTIL SQRLLKRFNF EDMVTNTRIY RDLDELKSSD LAIEKLPWWI THKDFWDFTT EIDWSIQKPF MHTPQNYYQH LTPEQITQYN SRLTEVMEWK KTSKVLGFTH RDYAMKRGAD ITSLLPNLAG IDENGKSVLY WTGSPKLMDT IPTPEDMGCP KYEGTPEENL RMIKAFLKIC GASKVRAVPI DAKFKSVQPK FYAPNVPLVY ESVDKPYSTE NKRVIPQKMQ WAIVFSTQGG NNLTAQGNNW IGSLGAAIYS GGPSDFIQIQ AQRFLKILGY NSIVSGISYN LQSWPAMGVA SGMGELGRIQ ISISPFFNCD RAIRCIITDL PVSLSQPIDA GITRFCIKCG ICANICPVSA INSNPEPSWD IWSSDPSNPN LKPELFNNPG KKTWYLGHHL CSIFGRDAND SKCGLCMINC TFHKSNNQV
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