Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1317 |
Symbol | rdhC |
ID | 8658242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 1215292 |
End bp | 1216353 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | sensory box sensor histidine kinase |
Protein accession | YP_003330744 |
Protein GI | 270308686 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAG ATATTTCCTT GAAAAAGAAT AGCCTGCAAA ATCTGGTGGA CATGGTATTG CTGGATAACG CCCAAGATGA TGTTATAGTT CTGGATCCGG ATGCAGTGGA AATTGTTTAT ATAAATAAAA AAGCTGCCCA AGCAAGGGGA TACGAACCCG AAGAACTTAT CGGAACATCC CTTCATATTC TTCACACCCC GGATTCTGTT ATCTCACTCA AGAAGAACTG GAGTAAAAGC ATACGAATAC TCGAGCGAAA AGGTTTTAAT ATCGGGACAA TTGTTCATGT ATGCAAAGAT GGTTCTATCA TAATCTCAGA ATGTTTAAGC CGTTTAATCA AAATTGGCGA AAAAAAATAT GTTATGGCAA CCCATAAGAA TATCTCTGAT GATAACAATC AAATTGGCAC TTCGGAAAGG GCAGCCGCTT ATGTCAATGC CCAAGAGCAG GAGCGCGAGT GGATTTCTAT GGAACTCCAC GATAGAGTGA TTCAAAATAT GACCTCTATT TTGCATAATC TTGACTCGTT TTGCCCAAAG GATACAGATA CAAAAAATGC ACTCCGAAAT ATTTCAGAAC AGTTATCCAA AACCATTCAG GAAACAAGAT TTATCACGAA AGAGCTTTAT CCAAGCGCAC TGGAGAGATA CGGTTTAATC CCGATGATAA AAGATGAATT GTATAAACTG GAACAGGAAA TGCCCTGTGA AATTGACCTT TCTGCTCCGG GTAAACTTAC AATCCCCCAA TACCTGTCAT CAACCCTGTA TCGGGTCATA CATGAAGCTT TAAATAACAT AAAAAAACAC TCTAAAGCCA CCAAAATAAA GCTCACGCTG GATACCCAAA ATAACCAGAT ACACCTAACC ATAACTGATA ACGGTATAGG TTTGAATACA AACTTGCCTG ATACCAAGCG TCCTAGCGGA ATAAATATAA TGCGCCAGAG AATAAGTATA GTCGGGGGTG ATTTGGTTAT TAAAAGCAGC ACCAAGGGAA CAACTCTAAA AGTAATAGCC AATATACCGG AAGAATATTG TGATGAATTA CCAAAACCCT GA
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Protein sequence | MAKDISLKKN SLQNLVDMVL LDNAQDDVIV LDPDAVEIVY INKKAAQARG YEPEELIGTS LHILHTPDSV ISLKKNWSKS IRILERKGFN IGTIVHVCKD GSIIISECLS RLIKIGEKKY VMATHKNISD DNNQIGTSER AAAYVNAQEQ EREWISMELH DRVIQNMTSI LHNLDSFCPK DTDTKNALRN ISEQLSKTIQ ETRFITKELY PSALERYGLI PMIKDELYKL EQEMPCEIDL SAPGKLTIPQ YLSSTLYRVI HEALNNIKKH SKATKIKLTL DTQNNQIHLT ITDNGIGLNT NLPDTKRPSG INIMRQRISI VGGDLVIKSS TKGTTLKVIA NIPEEYCDEL PKP
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