| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_131 |
|---|
| Symbol | |
|---|
| ID | 8657085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 131346 |
|---|
| End bp | 133379 |
|---|
| Gene Length | 2034 bp |
|---|
| Protein Length | 677 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | |
|---|
| Product | pyridine nucleotide-disulphide oxidoreductase protein |
|---|
| Protein accession | YP_003329632 |
|---|
| Protein GI | 270307574 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000174101 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGG AATCTATTTA TAATGCTATT TTTTGTGGTC TAAAAAATGG GATCGTACTA
ATTGATAGAT ATTCCGGAAC TATTATGGAT TGTAATCCCG AGTTTGAAAA TATATCAGGT
AGAACAAAAA TTCAGCTTAT TAGTATGAAG ATTTGGGATT TGATCACTAT TGAGGATAAT
GAAGAAGTAG TGGCTTTTTT CAATCAAATA TCAACAACAG GAGACGGAAA ATCTAACGCT
GTTGTACTGG AGAAGGTTGA CGGATCAAGA ATTACAGTAG AATTTAACGC TAATACAATT
ATTAACTCTG GGCAAGAGTA TCTTTGTACT ATAGTGAGAG ATATTACTTT GCAAAGGAAG
TTGGAAGAAC AGTTGCAAAG TAATTTAGAT CTCTTAAAAA ACGTGTTTGA TAATATGTCA
GAACGTGTTG CGATTGTTGA TTATAATATG AGGTATATTT ATCGTAATAA AGGGTACTTT
CCGTTTAATA TTCCTGATGC CGAAGAAGTA ATCGGGAAAA GCATTATGGA CATTTATCCA
ACCGTCGAAA ACAGTGATGG TTATAAAATG TCCTGTAAAT GTATGAATGA TAGATTAGCA
GGATCTTGCG AAAGCTGTGT AATAGTTAAT GATAAATCCT ATTGGCTTCG ATATTATTTT
CAGCCAATTA AAGAAGGGTT ACTTATAGTA ATCACTGATA TTACTGAGCA TAAATTAGCC
AACCAAAGAC TATCGCAAAT AAAAGATGAG TTAGAAAAAA CAATAGAGAA ACGTCACCTT
GAATTAATCC ATTTGAATGA AAAATTAAAA ATAGAGGTAA ATGAGCGTAA GAATATCGAA
TATAAACTCG AAAATGAGAT GAGTCGACGT GAGTACTTCA CGCGTGCATT GGTACATGAA
TTAAAAACAC CACTTACTGC GATAATTTCT TCAAGTGAAG GTTTGCAGAA TGATATTAAG
CGAGAAACGG CAAAGAAGTT TGCTAAAAAT ATTCAAGATG GAGCTTCCAC ATTAAATAGA
AGGATTGATG AACTTTTAGA TATTACAAAA GGTGAGATTG GAATCTTAAA TATACATATA
AAACCGATGG ATATTAAGAA AAGTTTAGAA AAAGTTCTCG ATAGTGTTTC TCCGGAAATT
CAACGAAGAA ATCAAACATT TGTATTAAGC TTACCTGCTT TTTTACCGTT AATAAAAGCC
GATGAGGAGC GTTTTCAACA GGTTGTAATA AACCTGATAA ACAATGCATT GAAATTCAAT
AAAGACTATG GCAGGATATT TATTGAAGTG AGAAATGGTG ATGCCTCTGT AATATTCACT
GTGCGTGATG AAGGTTTGGG TGTAAGGGAA GAGGATTATG AGAATATATT CATGCCTTAC
TTCTGTGTAA AAAATATTAA GTCAATTGAT GCCGGTGGAT TAGGGTTAGG GTTGGCTCTT
TCAAAAATGT TAGTAGAATT GCATGGTGGG AAAATATGGG TGGAGAACCA TGAAGACGGA
GGTGCTATTT TGGGATTCTC CTTGCCAGTT TAA
|
|---|
| Protein sequence | MILISYFCFV NPLFETLLSL HTDTGYRVGQ RTEGVVELTC LSRQRSSRID NVLYVASIIS
GTRSFKYRRK YFKKETYMAK TKAPVEKLES AEEIQKDGKV VSTKRTKGSE FFWTQSRCTG
CNRCASVCPV DAIKLDRDKT PTKRVGTSPC TRACPAGLDI PRYVRFVADG NASAATAVMR
EKIPFPSVCG YVCFHPCELE CQRQKFDEPI AIRALKRYAA ENDDGSWKNN LKIAPPTGKK
VAIIGSGPAG LTSAYFLTLL GHEATIFESM EYAGGKMFYS IPEHQLPKDI LNKEIKTITD
LGVTIHTSCQ VQSVQTLFKQ GYNSVLLSTG VLGLDEGLLL PCDETVESNL IKGSDFLKSI
KSTTKESLGD KVVVIGGGSE AYNSAFAAKN LGVSEVHLVC SRHTGSKEAS PEEVDRAIDA
GVTVHPSLDF VKLVKSDDKI EGVELFRIRS YGYDKDNRLH YEIINDTRCL IPADTVITTV
APDEKPGADY LTVVQPGVFA AGDGISGARS VIEAMAAGRS VAGLIDKYLG GEGNLDETLA
PPEKDIKPLS EPKGQNRSQI ELNLVKQAGG DKVEIEKTLS PEAAKKEARR CLRCDIVHQV
HDYSLDTSSC TYCGRCVNAC YWDAITSGYG YEAAAKKRQA EIAALEEKHS VYNYAIRILP
IAIGLMILAA AVAKLFK
|
|---|
| |