Gene DhcVS_1298 details

Gene Information

• Locus tag: DhcVS_1298
• ID: 8658223
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: -
• Start bp: 1193585
• End bp: 1195783
• Gene Length: 2199 bp
• Protein Length: 732 aa
• Translation table: 11
• GC content: 45%
• Product: hypothetical protein
• Protein accession: YP_003330725
• Protein GI: 270308667

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGTA CGCCGATTAT TCTTTTCAAT ATAGATGATT TCCTAAGTCG ATTACCCGAT 
GCCAGAAAAG TGAGAGATAA TCACTGGGTT GCCTCATGTC CAGTGGAAGG CCATTCTACT 
CCTCAAAATC ACCTGTCTAT TACGGATGTT GGAGATAAGG TCTTACTAAC ATGCTTTTCG 
AATCGAAATC ATAGTTATCA GCAGATCTGT CAGGCACTTG GTCTTAAATC TGACTCTCAG 
CCAACTGAAT TTAAGCGTTG TATAGATTCT CTATACGCCT ACAAAGACAG AGATGGAAAT 
CTCCTCTATC AGGTAGTCAG ATACAAGCCT AAATCCTTTG CTCAAAGAAG ACCAGATGGC 
AGGGGTGGCT GGATCTATAA CCTTAAGGGA ATTACTCCGG TTCTCTATCG CCTACCCGAA 
CTATTAGCTA CGCCTCAGGA CCATGTGATT TTCATAGCCG AAGGGGAGAA GGGAGCTAAT 
TCTCTGGTTG AGCATGGCCT AAATGCCACC TGTTCTCCTA TGGGGGCAGG AAAGTGGAGA 
GAGGAATACA ATTCAGCCTT CACCAACCGT AGTTTAGTCA TCCTGCCGGA TAATGATGAA 
CCGGGAGAAA ACCATGCCCA ACAGGTGTTT GACTCCCTAT CAAAAGTAAC TCCCACTATT 
CAAATACTTC ACCTGCCAGG TTTGAGGGAA AAAGAGGATG TGTTTGATTG GTTTGCGCAA 
GGGCATACCG CGGAAGAACT CCTTGAATTA GTCGAATTAA TTCCTTCTCA ATCAGACCTT 
GACCTCGCTG TTTTGCTTGA TGACATAGCA AGTTTTATCC GGTCTTATGT CATTCTGAAC 
GAATATCAGC TTCAGGCTAT CTCTCTGTGG GTACTCCATA CCTATACTTT AGAAAATGCT 
CTTACTACTC CCTACTTGAA TATCTATTCA GCCGAGAAAA GAAGTGGTAA GACTCGCTTG 
CTTGAGGTAT TGGAAGTACT GGTTGCCCGT CCCTGGTTTA CCGGACGGGT AACCTCAGCC 
GTACTTGCCC GCAAGGTAGA TGCCGAATGC CCTACCCTTC TTCTGGATGA ATCCGATGCT 
GCCTTCAAAG GTGAGAAGGA ATATTCCGAA ACCCTGAGGG GCATATTAAA TACAGGATAC 
CGAAGGGGTG GCAAATCCTC GGTTTGCGTG GGTAAAGGCG CAGACATCTC CTATAAAGAC 
CTATCCACCT TCTGCCCCAA AGCAATTGCT GGCATTGGTA AGCTACCGGG CACTCTTGCT 
GACCGGAGCA TCCCTATCCA GCTTAAACGC CGGAATGTTA ATGAGACAGT TGCAAAATTC 
CATCCCCGAA AAATCACAAC CGAAATCCAG AGATTGAAAG AGAGATTAGT TCAGTGTACC 
TCCATTGGTT TAAGTGAGAT TGAACTTATC ATACCCTCTG AACTTGATGA CCGGGCGGCT 
GACTGCTGGG AACATCTCCT AATCATTGCA GAAACAGCAG GCAATTCATG GCCTGAAAAA 
GCCCGCATTG CGGCCATTGC TTTAATGACT GGAGAAGTTA GGCAAGACGA TTCACTTGGG 
ATTCAACTTC TAACTGATAT ACGGGAAATA ACTAAAGACA AAAGTGAGTG TATATCTTCT 
GCTGACTTAA TCGAGGCTCT CCTCAAGGTA GATGAATCTC CATGGTCAGA CCTGAATGGC 
AGATCTCTTA ATGCCAGAAG ACTGGCTGCT CTACTTAAAA CCTATGGCAT TCACAGCCAG 
ACTATAAGAG AGGGCAACCG AACTTTCAAA GGCTACCAAG TCGCTGATTT TCAAGATGCT 
TTTAACCGCT ATCTTTCTAA AAATGGACTT CTATCCGTAA CATCCGTAAC AGATAGCTTT 
GAGCCAATCG TAAAATGTGA GCCAAATTCA TCCGTAACAA ATGGTCCAAA AGAGCAAAAT 
GTTACGGATA ATCCTCAGAG CTATGCCAAT CGTAATGTTA CGGATGTTAC GGATAAAACC 
CTGTTTATCA GAGAAATAGA CAAAAATGAG CTGGATGATG AGTCCGAATC GGATACTTCC 
TGCGAAGTTT TAGACTCATG GAGAAAGACA GCTATTCCGG CTTGGAGACG GGTTTTAAAA 
GAAAGTATCA GTCAGGGGGA TATAAAACGC GAGGAATATG CAAGAAAGAT GCTTCAGGAA 
GTCTTAAAAG ACCCGGCCTA CCGGGAGGTC CAGCCATGA 

 

Protein sequence

MKSTPIILFN IDDFLSRLPD ARKVRDNHWV ASCPVEGHST PQNHLSITDV GDKVLLTCFS 
NRNHSYQQIC QALGLKSDSQ PTEFKRCIDS LYAYKDRDGN LLYQVVRYKP KSFAQRRPDG 
RGGWIYNLKG ITPVLYRLPE LLATPQDHVI FIAEGEKGAN SLVEHGLNAT CSPMGAGKWR 
EEYNSAFTNR SLVILPDNDE PGENHAQQVF DSLSKVTPTI QILHLPGLRE KEDVFDWFAQ 
GHTAEELLEL VELIPSQSDL DLAVLLDDIA SFIRSYVILN EYQLQAISLW VLHTYTLENA 
LTTPYLNIYS AEKRSGKTRL LEVLEVLVAR PWFTGRVTSA VLARKVDAEC PTLLLDESDA 
AFKGEKEYSE TLRGILNTGY RRGGKSSVCV GKGADISYKD LSTFCPKAIA GIGKLPGTLA 
DRSIPIQLKR RNVNETVAKF HPRKITTEIQ RLKERLVQCT SIGLSEIELI IPSELDDRAA 
DCWEHLLIIA ETAGNSWPEK ARIAAIALMT GEVRQDDSLG IQLLTDIREI TKDKSECISS 
ADLIEALLKV DESPWSDLNG RSLNARRLAA LLKTYGIHSQ TIREGNRTFK GYQVADFQDA 
FNRYLSKNGL LSVTSVTDSF EPIVKCEPNS SVTNGPKEQN VTDNPQSYAN RNVTDVTDKT 
LFIREIDKNE LDDESESDTS CEVLDSWRKT AIPAWRRVLK ESISQGDIKR EEYARKMLQE 
VLKDPAYREV QP