| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1196 |
|---|
| Symbol | purF |
|---|
| ID | 8658124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 1108387 |
|---|
| End bp | 1109805 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | amidophosphoribosyltransferase |
|---|
| Protein accession | YP_003330636 |
|---|
| Protein GI | 270308578 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCATGAAT CTTGCGGCGT TTTCGGTGTA TTTGCCCCCG GTCAGGATGT AGCTCGGCTC
ACATTTTTCG CTCTGTTTGC CCTGCAGCAC AGAGGTCAGG AAAGTTCAGG AATATCTACA
TCTGACGGAC AGGCACTTAA GCTTTATTCA CAGATGGGGT TGGTTTCCCA TATATTTACC
GAAGATATAC TCAAGAAACT GGACGGCCAT ATTGCCGTAG GCCACAATCG CTATTCCACC
ACCGGCTCAA GTCTGCAAAT CAACGCCCAG CCCTTTGTAA TGGGTCAGGG TGACAATATT
ATGGCCATAG CCCACAACGG CAACATTGTA AATTCCGAGG CTTTGAATAC AGAGCTGACT
TCTCAAGGCT ATATCTTTAA AACCTCCACT GATACTGAAA TAATCGGCCA GCTTATCCTT
TCCTCAGTTG AAACTGACTG GGTCAAACGG ATACGCTATG CCATGAACCG CCTTAAAGGG
GCATTTTCCT GCACCATTAT GACCAAAGAC ACCCTCTATG CCATGCGTGA CCCACTGGGT
GTCCGCCCGT TATGTCTGGG TAAAATGCAG GGGGGCTACG TAGTTGCTTC CGAAAGCTGT
GCACTTGACC ATATCGGGGC TGATTTCATA CGCGAAATAG AACCGGGTGA GATTTTGGCC
ATAAATCAAA CCGGCGTAAC CAGTTTCAAA CAGCAAAGCT CCCGACGGGC TTTGTGCATA
TTTGAGTTTA TTTATTTTGC CCGTCCCGAC AGCCAGATAA ACGGGCGTCT TTTATATTCC
GCCCGGCAAG CCATGGGAGC GGAACTGGCC AAGGAATACC CGGTAGATGC AGACCTGGTG
ATAGGTGTAC CTGACTCCGC CACGGCTGCC GGCATAGGCT ATGCCGTAAG TTCAGGCATC
CCTCCGGCCG AAGGCCTTAT CAAAAACCGT TATATGGGCA GAACTTTTAT CCAACCGGAC
CAGCGGTTGC GTGATTTGGG TGTGAAGCTG AAGTTCAATC CCCTGAGGAG TGTTTTGGAA
GGTAAGCGGG TGGTACTGGT AGATGACAGT ATAGTCCGCG GAACTACTAC TCCCCAGGTT
ATACGCCTGC TTCGTAAAGC CGGTGCCAAA GAAGTACACA TGCGGGTATG CGCCCCCCCT
ATAACCAACC CCTGTTTCTT CGGTGTAGAT ATGGCCACCC GTTCGGAACT TATTGCCGCC
AAAATGAGCG TGCCGGAGAT ACAAAAATAC ATAGGCGCGG ATTCACTCGG TTACCTCAGC
CTGCCCGGTC TGATAAAGGC GGTTGGACTG CCCAAAGAAA ACTTCTGCCT GGCCTGTTTT
ACCGGCGAAT ATGCCCTGCC TGTTCAGTTG GAGATGGATA AATTTGCACT CGGCAATCAG
CGGAATAACT GTTGCCAAAT GCCATCACCC GAAAGCTGA
|
|---|
| Protein sequence | MHESCGVFGV FAPGQDVARL TFFALFALQH RGQESSGIST SDGQALKLYS QMGLVSHIFT
EDILKKLDGH IAVGHNRYST TGSSLQINAQ PFVMGQGDNI MAIAHNGNIV NSEALNTELT
SQGYIFKTST DTEIIGQLIL SSVETDWVKR IRYAMNRLKG AFSCTIMTKD TLYAMRDPLG
VRPLCLGKMQ GGYVVASESC ALDHIGADFI REIEPGEILA INQTGVTSFK QQSSRRALCI
FEFIYFARPD SQINGRLLYS ARQAMGAELA KEYPVDADLV IGVPDSATAA GIGYAVSSGI
PPAEGLIKNR YMGRTFIQPD QRLRDLGVKL KFNPLRSVLE GKRVVLVDDS IVRGTTTPQV
IRLLRKAGAK EVHMRVCAPP ITNPCFFGVD MATRSELIAA KMSVPEIQKY IGADSLGYLS
LPGLIKAVGL PKENFCLACF TGEYALPVQL EMDKFALGNQ RNNCCQMPSP ES
|
|---|
| |