Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1070 |
Symbol | |
ID | 8658001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 996540 |
End bp | 997310 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | transcriptional regulator, MerR family |
Protein accession | YP_003330515 |
Protein GI | 270308457 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.01274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTTATC ATAGTGTTAT AGAAAAACTG CTGACAGTGG GCGAACTTGC CAAAATGGCC GGAGTGAGTA TACGCACTCT GCGCTTTTAC GATGTGCACG GACTGCTGAA ACCCCGCAGT TATACTGCTG CCGGATACAG GCGGTATGGC CGGGATGAGG CTTTGCGCCT TCAGCAGATA CTCTTTTACC GTGAGCTGGG GTTTTCACTG GAAGAGGTAA AAAAGCTGAT TGATGACCCG GCTGTCAGCC TGCTTGAAAA TCTGCGCTGT CAGAGCAGTT TGCTCAAGGA CAGGGAAAAA CAGCTTGCAG ATTTGCAGAA AACTATTCAA AAAACCATAG CCAGTCTGGA GGGGAAAATA GAAATGGAAA TAAACGAATA TTACCAGGGA CTTCCCCAGG AAAAAGTTGA TTATTATCGC CGTGAAGCCC GCCGCCGGTA TGGCGAGGAG ACAGTGCGGC GTTCCGAAGA GATGGTAGTA AAAATGGGTA AAACCAAAAT GGCAGAGCTT CAGGCACAGG GGCAGTCTAT ATTTGAAGAA CTGGCTGAGA ATATACCCAA CGGACCTGCC CACTCTCTTT CGCAGGCACT GATAGCTAAG TGGCGTGAAT GGCTGGAAAA CTTTGCTCAG TATACTGATG AAGGTTTGCT GGGCCTTGCC AGAGGCTATC GGGATGACCC TGAGTTCAAG GCATTTTTTG ACAAGATACA TCCCGGATTG GCCGCTTTTA TTGCGGATGC GGTTGAGGTG TATTTCAAGA AAACCGCTTG A
|
Protein sequence | MVYHSVIEKL LTVGELAKMA GVSIRTLRFY DVHGLLKPRS YTAAGYRRYG RDEALRLQQI LFYRELGFSL EEVKKLIDDP AVSLLENLRC QSSLLKDREK QLADLQKTIQ KTIASLEGKI EMEINEYYQG LPQEKVDYYR REARRRYGEE TVRRSEEMVV KMGKTKMAEL QAQGQSIFEE LAENIPNGPA HSLSQALIAK WREWLENFAQ YTDEGLLGLA RGYRDDPEFK AFFDKIHPGL AAFIADAVEV YFKKTA
|
| |