Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1047 |
Symbol | |
ID | 8657978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 973731 |
End bp | 974570 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | DegV |
Protein accession | YP_003330492 |
Protein GI | 270308434 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.119875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTCA AAATAGTAAC CGACAGCACT TCGGATATCA GCCAGAAGCT GGCCGTTGAA CTGGGCATAA CCGTAGTTCC GCTGACAGTT TCGTTTGACA ATGAACACTT TAAAGACGGC CTAAGCATAA CACCTGACCA GTTTTTCAGC CGCCTTACTT CTCAAAATAT ATTCCCCACT ACCACCCAGC CTTCACCGGG AATATTTCTG GAAACATTTG AAAAACTATG CGAAGAAACA GACGAGATAC TGGTTATCAC CCTTTCCTCA AAACTTTCCG GTACTTATTC ATCTGCTAAA AATGCCGCCG AGATGATACA CGGCCGCTGC CAGGTGGAAG TAATAGATTC CGAAAAGGTC ATAATGGGAA CCGGGCTGCT GACTATTTAT GCCGCCGAAC TGGCCAAAAC CGGTCTCAAT CTTAAGGAAC TCAGCCAGAC TATCCGCCAA AAAATGGCAG ACTGCCACCC CATCATGTAC TTTGACACCC TGACTTACCT CCACAAGGGA GGGCGAATGG GTAAAGCTCA AAGTCTAGTG GGTTCGCTGC TTTCTATAAA ACCCATTTTG AAAATGGAAG ACGGCATTAT CTGCCCCCTT TCCAAAGTGC GTTCCCGCAG AGCCGGCATC GATTACCTGT ATAAATTTAT CACCGCTTTC CCTAAGATAA AATACCTGGC GGTAGAACAC GCCACTAGCC CGGAAGATGC GGATGAACTG GTATCTAAAC TGGGAGAAAT ACTGCCCAAA GTGAAAATAT ACCGGTCGCA AATTGGACCG GTGGTAGGCG CCTATACCGG AGCGAATGCG GTAGCCGTTA CCGTTCTGGA AGACAAATAA
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Protein sequence | MTVKIVTDST SDISQKLAVE LGITVVPLTV SFDNEHFKDG LSITPDQFFS RLTSQNIFPT TTQPSPGIFL ETFEKLCEET DEILVITLSS KLSGTYSSAK NAAEMIHGRC QVEVIDSEKV IMGTGLLTIY AAELAKTGLN LKELSQTIRQ KMADCHPIMY FDTLTYLHKG GRMGKAQSLV GSLLSIKPIL KMEDGIICPL SKVRSRRAGI DYLYKFITAF PKIKYLAVEH ATSPEDADEL VSKLGEILPK VKIYRSQIGP VVGAYTGANA VAVTVLEDK
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