| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4873 |
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| Symbol | |
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| ID | 7261902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 5195720 |
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| End bp | 5197171 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643564783 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_002461303 |
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| Protein GI | 219670868 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCTTA TCATCGAACA TAGAGTACAT AGCGATTTTG ATTTAGACAA AAGCAAACTG
ATAAAAATTC TTGAAAATTC TTTTGATGAA ATCTTTGTCG TCAATAAACA CGGTATTGTG
ATCTATGTTA ACGAAGCCTG TCAGAAAAAT TATGACTTAA AGCCATCGGA CGTCATTGGC
AAAACGGTAC ATTATTTAGT CAGTGAAGGG TATTATACCC CGGCCATTGC CCCGCTGGTC
TTTAAAACCA GAAAAGCCGT CACCCTTGAG CAGGAAACCA AATCCGGCAG GAAACTGCTC
GTGACCGCTA TCCCGGTATT TGATGAAAAA AATGAACTGG ATTTTATCGT CATGAATAGT
CGCAATATTA CGGAAATAGA GCAATTGCGG CAGGATTTAG AAAAAACAAA GGAGTATTAC
AAAACTCAAA TTCAACAATT ACGTCAAAAA GAGCTTTCGA ACCAGGATGG ATTAGTCTTC
CAAAGTGAAA AAATGAGAGA ATTTATGCAC ACTGCCCAAA GAATAGCTCC CTTTGACACC
ACTATTTTAA TCTTAGGGGA ATCAGGAACA GGAAAGAATC TGCTCGCCAA ACAAATTCAC
ACCATGAGCA ACCGCAGGCA CGAACCCTAT ATCTGCATAA ATTGCGCAGC TATTCCGGAA
CAACTGCTGG AGTCTGAACT ATTCGGCTAT ACAAAAGGGG CTTTTACAGG AGCTGAACGT
TCAGGAAAGC CAGGACTGAT CGAGCTCGCC CATAAAGGAA CTCTCTTTTT GGATGAAATC
GGGGAAATTC CTCTATCCCT TCAAGCAAAG CTTTTACAAC TTGTCCAGGA CCATACCTTT
ATACCCATAG GAGGAACGGA ATCCAGGCAA GTCGATATTC GCATTATCAG CGCGACGAAC
TGTAATTTAC CGAAGTTGAT TGAACAGGGC CGATTCAGAT TAGACCTCTA CTATCGGCTA
AATGTTATTG AAATTGAGAT TCCTCCTGTG CGCGAGCGAA GTGACGATAT TGTTCTTTTA
TTGCACTATT TTCTAAATAA ATTTGACATC AAATATTCTA CATCCCATTA TTTCAGCGAG
GAATGCCTGG CTGTTTTACA AAATTACCAA TGGCCTGGAA ATGTTCGGGA AATTGAACAT
TTGGTTGAAC GCTTGGTGAT TACCGTTTCA GAAAATTGCA TTCTCCCTAA GCATTTACCG
CTACCCAAAC ATGCTGCTAT GCCTGAAGAT ACTGAAAAAA GTCCTTCCGC TCTAATGAAG
ACGGCACTTA ACAAAGAATT AAGGGATGAA TTCACTGAGT ATTCCTTCAA GATTAAAGAA
AGAGAAACCA TTCTGGAGTT ATATGAAGAA TTAAGGAGCT CCTATAAAGT TGCCAGCATT
TTAAAAATCA GCCAAAGCAA GGTATCGCGG ATTGTGCGGA CTTATTCAGA AAAGAACATG
TCAAATTCTT AA
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| Protein sequence | MSLIIEHRVH SDFDLDKSKL IKILENSFDE IFVVNKHGIV IYVNEACQKN YDLKPSDVIG
KTVHYLVSEG YYTPAIAPLV FKTRKAVTLE QETKSGRKLL VTAIPVFDEK NELDFIVMNS
RNITEIEQLR QDLEKTKEYY KTQIQQLRQK ELSNQDGLVF QSEKMREFMH TAQRIAPFDT
TILILGESGT GKNLLAKQIH TMSNRRHEPY ICINCAAIPE QLLESELFGY TKGAFTGAER
SGKPGLIELA HKGTLFLDEI GEIPLSLQAK LLQLVQDHTF IPIGGTESRQ VDIRIISATN
CNLPKLIEQG RFRLDLYYRL NVIEIEIPPV RERSDDIVLL LHYFLNKFDI KYSTSHYFSE
ECLAVLQNYQ WPGNVREIEH LVERLVITVS ENCILPKHLP LPKHAAMPED TEKSPSALMK
TALNKELRDE FTEYSFKIKE RETILELYEE LRSSYKVASI LKISQSKVSR IVRTYSEKNM
SNS
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