| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4848 |
|---|
| Symbol | |
|---|
| ID | 7261877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 5167267 |
|---|
| End bp | 5168631 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643564759 |
|---|
| Product | Propeptide PepSY amd peptidase M4 |
|---|
| Protein accession | YP_002461279 |
|---|
| Protein GI | 219670844 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02889] germination protein YpeB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.276733 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGAA ACGTTTGGAT TGGAATTTTA GGAACCGCTT TAATCCTCTC CCTGGCTTGG
GGATTTACTG AGTATCGGCA AGCGGAACAA CTGGAAAAAG TCAGCATAAA TCAATATCAG
CGTTCTTTAC GGGATTTCGC CAGCCATCTG GACCAATTGG AAACAGATTT GGCTAAAGGC
CGTGTGGCTG CCGCTTCCAG CCAAAGAGTA CTCTACCTAA GCCAGGCGGG AAGCATCAGT
GAATCGGCGG TTAAAGATTT AGCTCAGCTT CCGGCTGAGG AAAGCGGCCT GAGTTATATC
AGTGAGTTTT TGAATCGCAC AGGGGATTTA ACACGAAGCC TGGCCTATCA AATCTCAGTG
GGTCACACAC CCACTGCAGA AGATGATAAA AATCTGACCG ATGTCCACGA ACGCCTTTTG
GCCGTCAATC AAAAGGTGCA GGATCTGGTG CAGCGAGTGG ATACGGAAGG GCTGGCCTGG
CTGGATAATC AGTCATTATG GAATCGTATG GTAGGCTTTT GGCGGACAGG AACGGCGGAA
GCTGCGGCGG AATCGGCCGA TGGTCCTGCC AGCTCAGTGC GCTCCGGCCT GGATCAATTG
AATGCCAGCC TGCAAAAACT TCCGCCCTTT TCCTATGTGG GCGAATATGA ATCCCGCTCT
GTAAAAGAAC CTCTGGGCCT GCCCCGGGAT GAGGTGGATA AGGAGACAGC CTTAAAGGCC
GCCAAGGATT TCTTAAGCAA GGTAGGATAC CCGGAAAGCA ATCCGGAGTT TTCCGGCGTC
AGTCAGGGTG CTTTAGGAGT TTACATCTTT AAACAAAACG ATCTCTTCAT GACCGTCAGC
AAACGGGGCG GTAAAGTGCT GATCTATCGC GATCAACGGG AATTCAACGA GCGGACCATG
AGTGCGGAAC AGGCCAAGGA AAAAGTGGCC CAGACCCTTA AGGCCTTAGA ATGGAATCTC
GTGTTGACCT CGACTGAAGA CTTCGGTGGC TATCTGCAGC TGGAGTATGT CTGGGAGGAA
AGCGGTACAC GTTATTACCC AGATAAACTC CGAGTCACAG TGGCTCTGGA TAACGGGCAG
ATTATCGGCT ACGATTCCAC CCCTTACTAT GCCTATCACC AGAAACGCAA TTTCACTAAA
AAGCTGACCA TGGAACAGGC AAGAGCCAAG CTCAGACAGG GCTTCCAAAT CAAAGAGACC
CGGACGGCTG TAATTCCGGT CATGGGCAAC AAGGAAGTTA TGGCTTACGA GTTCAGGGGC
GTCTATCAGG ATGAGGAATA TCTCGTTTAT ATCAATGCCG AGACTGGAAT CGAGGAAAGG
ATTCAGCGCA TTATTAAAAC TCCTCGCGGG GAGTACCTGC AATAG
|
|---|
| Protein sequence | MRRNVWIGIL GTALILSLAW GFTEYRQAEQ LEKVSINQYQ RSLRDFASHL DQLETDLAKG
RVAAASSQRV LYLSQAGSIS ESAVKDLAQL PAEESGLSYI SEFLNRTGDL TRSLAYQISV
GHTPTAEDDK NLTDVHERLL AVNQKVQDLV QRVDTEGLAW LDNQSLWNRM VGFWRTGTAE
AAAESADGPA SSVRSGLDQL NASLQKLPPF SYVGEYESRS VKEPLGLPRD EVDKETALKA
AKDFLSKVGY PESNPEFSGV SQGALGVYIF KQNDLFMTVS KRGGKVLIYR DQREFNERTM
SAEQAKEKVA QTLKALEWNL VLTSTEDFGG YLQLEYVWEE SGTRYYPDKL RVTVALDNGQ
IIGYDSTPYY AYHQKRNFTK KLTMEQARAK LRQGFQIKET RTAVIPVMGN KEVMAYEFRG
VYQDEEYLVY INAETGIEER IQRIIKTPRG EYLQ
|
|---|
| |