Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4825 |
Symbol | upp |
ID | 7261854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 5146718 |
End bp | 5147347 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643564736 |
Product | uracil phosphoribosyltransferase |
Protein accession | YP_002461256 |
Protein GI | 219670821 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0035] Uracil phosphoribosyltransferase |
TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000000576364 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAG TTCATATTCT GGATCATCCT TTGATACAGC ATAAATTATC CTTAATCCGA GACGAAAATA CAGGGTCCAA AGACTTTCGT GAACTGGTAG AAGAAGTTTC CATGCTTATG GCCTATGAAG TGACCCGGGA TTTTCCTCTG CAGGATGTGG AAGTAAAGAC CCCGGTGGCT ACGATGACAG CCAAGGCAAT AGCCGGACGC AAAGTCGGGT TGATTCCGAT CTTAAGAGCC GGTCTGGGCA TGGTGGATGG CATGCTGAGA TTAATCCCCA CCGCCAAAGT TGGCCATGTG GGGCTTTATC GGGATCCGGA AACACTGAAG CCGGTGGAAT ACTACTGCAA ACTCCCTACC GATGTGGAAG AGCGTGATTT GATCGTCATT GATCCTATGC TGGCTACGGG GGGATCGGCT ACGGCAGCCA TCACCTTTCT GAAAGACAGG GGAGCAAAAA GCATCAAGCT GATGTGCCTG ATCGCTGCTC CGGAAGGGAT CAAAGAAGTT CAGAACTACC ATGACGATGT GGATATTTTT GTGGCGGCAG TGGACGATTA TTTAAACGAC CACGGCTATA TCATTCCGGG TCTCGGTGAT GCCGGGGATC GGTTGTTTGG TACCAAATGA
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Protein sequence | MAKVHILDHP LIQHKLSLIR DENTGSKDFR ELVEEVSMLM AYEVTRDFPL QDVEVKTPVA TMTAKAIAGR KVGLIPILRA GLGMVDGMLR LIPTAKVGHV GLYRDPETLK PVEYYCKLPT DVEERDLIVI DPMLATGGSA TAAITFLKDR GAKSIKLMCL IAAPEGIKEV QNYHDDVDIF VAAVDDYLND HGYIIPGLGD AGDRLFGTK
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