| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4747 |
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| Symbol | |
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| ID | 7261776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 5071395 |
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| End bp | 5073899 |
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| Gene Length | 2505 bp |
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| Protein Length | 834 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643564658 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_002461178 |
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| Protein GI | 219670743 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000758665 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTCT TAAATAAACT TTTTGATGAC AATGCTCGTG AGGTTAAAAA GTATCAGAAA
AAGATTGCTG CGATTAATGA CTTGGAGCCG GAAATCAAGG CGTTGTCTGA TGAACAGCTC
CGTGCCAAGA CCGATGAATT TAAACAACGG CTGGAGAATG GAGAGAGTCT GGACAGCCTT
TTGCCTGAGG CGTTTGCAGT GGTTCGTGAG GCTTCCTGGC GTGTCAATGG ACAACGGCAC
TATGATGTGC AGCTGATCGG GGGGATGGTC CTGCATGATG GCCGGATCGC CGAGATGCGT
ACTGGGGAAG GAAAAACATT GGTGGCAACC CTTCCATCCT ATCTGAATGC TTTGACAGGC
CGCGGTGTTC ATATCGTTAC CGTCAACGAC TATCTTGCCC GGCGTGACAG CGAAATGATG
GGCCGCATTC ACCAGTTCCT GGGATTATCG GTGGGTCTGA TCGTTCATGG CTTAAACTAT
GCTCAGCGGC GGGAAAGCTA TGCTGCAGAT ATAACCTATG GTACCAATAA TGAATTTGGC
TTTGATTATT TGCGTGATAA TATGGTGACC CGTCCTGATG GGTTGGTTCA GCGGGAACTT
CATTATGCTA TCGTCGACGA AGTGGACTCC ATTTTAATCG ACGAAGCCCG TACCCCGTTG
ATTATTTCCG GGGAGGCGGA CAAGCCGACC GAGCTCTATA ACCGGATTGC CATGATTATT
CCCCGCTTAA AGCCGGAAGA AGATTATAAT GTCAATGAAA AAGACCGGGT GGTCACCTTG
ACTGAACAAG GGGTCAGCCG GGTTGAAACC ATGCTCTCCG TAGAGAATCT CTTTGACGAT
CTGCACACAG AGCTGGCTCA TCATGTGAAC CAGGGCTTAA AAGCCCATGC CCTCTTTAAA
CTGGATCGGG ATTATGTGGT TAAGGACGGG CAGGTTATTA TCGTTGATGA ATTTACCGGA
CGTCTTATGT TTGGGCGCCG TTATTCGGAA GGATTGCATC AGGCGATTGA AGCTAAGGAA
AAAGTGAAAA TTGAAAAGGA ATCTCAAACC TTAGCGACCA TTACCTTCCA GAATTATTTC
CGGATGTTTG AAAAACTTGC CGGTATGACC GGTACCGCTA TGACGGAAGA ACCGGAATTC
AAAAAGATTT ACAAATTAGA CGTGGTGGAA ATTCCCACTA ATATGCCGAT GATTCGTGAG
GATCTGCCTG ATGTGGTCTA TCGGACTGAG GAAGGCAAGT TCAAGGCTGT CGTTGAGGAG
ATCATCGAAC GCCACAAAAA AGGACAGCCG GTTCTGGTGG GAACCGTATC GGTGGAGAAG
TCCGAGCGCT TAAGCAGTAT GTTGGAGCGC CGCGGCATAC CTCATCAAGT CCTGAATGCC
AAGTTCCATG AGAAAGAAGC CGAAATCATT GCCGGAGCAG GCTTGAAGGG CATGGTGACC
ATCGCCACCA ACATGGCGGG CCGTGGTACG GACATTATCC TGGGCGAAGA AGTAGCCCCA
CTGGGTGGTC TGCATATTAT AGGTACAGAG CGCCACGAAT CCCGCCGGAT TGATAATCAG
CTGCGCGGCC GTGCCGGACG TCAGGGAGAC CCTGGTTCTT CCCAATTCTT CCTTTCTCTG
GAAGATGATT TGATGCGCCT TTTTGGTGCG GATAATATCA CCGGGATGAT GGATAAATTA
GGGATGGACG ATTCCGTTCC CATTACCTCC AAGATGATCA GCCGCTCTGT AGAAACGGCT
CAGCGCCGGG TGGAAAACAG AAACTTCGAA ATTCGCAAGC ATGTTCTTGA TTATGATGAT
GTCATGAATC TGCAGCGGGA AGTCATCTAT GCCCAACGCC GTCAGGTGCT GATGGGTGGC
AACATTCAGG AGAGCATCGC CGATATGCTG GAAAAAGTGG TTCGGGAAAC GGTGGATATG
TTCGGCGCCC AGAGCCCCTA TCCTGAAGAA TGGGATCTTA ACAGCTTCCT GGAGTATGTG
GAAAATGTCT TCCTGCCCAA TCATGATATT ACAGCCGAGC AAGTAGGAAG CATGGAAAAA
GAAGAGATCG TGGAAATGCT TCTGGAGAGA GCACAAGCCC ATTACAAAAC CCGTGAAACA
GCTTTTGGCG AAGAGATCAT GCGGGAAATC GAGCGGGCTG TGATGCTGCA GGTCGTGGAC
AAGAAGTGGA TGGATCATTT GGATGCCATG GATATGCTCC GGGAAGGCAT TGGCCTGAGA
GCTTATGGGC AAAAGAACCC CTTGGTGGAA TATCGCCGTG AGGCTTATGA TATGTTCCAG
GGCATGATCA GCTCAATTCA GGAAGACACC ATCCGCTATA TTATGAGAGT GACACCTCAG
GTGACGGAGC AAAAACCGGA AGAACCTCAG CATGTCCGCA CCAACCGGGA TGAGGAACAG
CCGGCCCGTC CGGTTCATAA TGAGGGGCCC CAAATCGGCC GCAACGATCC CTGTCCCTGC
GGCAGCGGCA AGAAATACAA GAAATGCTGC GGAGCAGACA GTTAG
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| Protein sequence | MGFLNKLFDD NAREVKKYQK KIAAINDLEP EIKALSDEQL RAKTDEFKQR LENGESLDSL
LPEAFAVVRE ASWRVNGQRH YDVQLIGGMV LHDGRIAEMR TGEGKTLVAT LPSYLNALTG
RGVHIVTVND YLARRDSEMM GRIHQFLGLS VGLIVHGLNY AQRRESYAAD ITYGTNNEFG
FDYLRDNMVT RPDGLVQREL HYAIVDEVDS ILIDEARTPL IISGEADKPT ELYNRIAMII
PRLKPEEDYN VNEKDRVVTL TEQGVSRVET MLSVENLFDD LHTELAHHVN QGLKAHALFK
LDRDYVVKDG QVIIVDEFTG RLMFGRRYSE GLHQAIEAKE KVKIEKESQT LATITFQNYF
RMFEKLAGMT GTAMTEEPEF KKIYKLDVVE IPTNMPMIRE DLPDVVYRTE EGKFKAVVEE
IIERHKKGQP VLVGTVSVEK SERLSSMLER RGIPHQVLNA KFHEKEAEII AGAGLKGMVT
IATNMAGRGT DIILGEEVAP LGGLHIIGTE RHESRRIDNQ LRGRAGRQGD PGSSQFFLSL
EDDLMRLFGA DNITGMMDKL GMDDSVPITS KMISRSVETA QRRVENRNFE IRKHVLDYDD
VMNLQREVIY AQRRQVLMGG NIQESIADML EKVVRETVDM FGAQSPYPEE WDLNSFLEYV
ENVFLPNHDI TAEQVGSMEK EEIVEMLLER AQAHYKTRET AFGEEIMREI ERAVMLQVVD
KKWMDHLDAM DMLREGIGLR AYGQKNPLVE YRREAYDMFQ GMISSIQEDT IRYIMRVTPQ
VTEQKPEEPQ HVRTNRDEEQ PARPVHNEGP QIGRNDPCPC GSGKKYKKCC GADS
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