Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4734 |
Symbol | |
ID | 7261763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 5053337 |
End bp | 5056159 |
Gene Length | 2823 bp |
Protein Length | 940 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643564645 |
Product | excinuclease ABC, A subunit |
Protein accession | YP_002461165 |
Protein GI | 219670730 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.332226 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAGA ACTTTATCAA AGTCCGCGGC GCCCGCGCCC ATAACTTGAA AAATATCAAT GTGGATATCC CCAGAGACCA GCTGGTGGTT GTCACCGGCT TATCCGGCTC CGGAAAATCC TCGCTGGCTT TTGACACCAT TTACGCTGAA GGTCAACGCC GCTATGTAGA ATCTCTGTCT GCCTATGCCC GTATGTTTCT TGGGCAAATG GACAAGCCGG ATGTGGATTA TATCGAAGGC CTGTCGCCGG CCATCTCCAT TGACCAAAAA ACGACCAACC GTAACCCCCG CTCTACAGTG GGAACGGTGA CGGAAGTCTA TGATTATCTG CGTCTCCTCT ATGCCCGGGT CGGCCACCCC CATTGTCCCC AATGCGGCAG AGAAATCAGC CAGCAAACGG TACAGCAAAT GGTGGATCAG ATCATGGTCT ACCCGGAACG CACCAAGCTG CAAATTTTAG CCCCCTTAGT CAAAGGGAAA AAGGGTGAGC ATGTCAAAGT GCTTGAAGAT GCCCGCAAGG CGGGATATGT ACGGGTAAGG GTGGATGGTG AAAATCGGGA TTTAAGCGAA GAGATTAAAT TAGAAAAAAA TAAGAAGCAC TCCATCGAAG TTGTGGTGGA CCGTATCGCT TTAAAGCCTG ATAGTGCGGT CCGTCTGGCC GACTCCCTGG AAACGGCTTT GAAGCTGGGG GAAGGAAATG TCCTTGTGGA CATTATTGAT AATACGGAAA TCCTGTTCAG TGAAAATTTT GCCTGCCCGG ACTGCGGTAT AGCCCTTGAA GAGATCTCTC CCCGCCTTTT TTCTTTTAAC AGCCCTTATG GAGCCTGCCC TGATTGTACG GGCTTAGGGG CCAATCTGGA AGTGGATATC GACTTGATCA TTCCTAATAA GAAGCTGAGT CTCGGCGAAG GAGCCATCGT CCCCTGGGCC AAATCCCAAT CCAGCTACTA TCCGGCCATG ATGGCGGCGG TCAGTGAAGC CCTCGGTTTT ACCATGGATA CTCCCTTGGC AGAACTCTCT GAAGAGCAAT GGAAGGGCCT GCTGTACGGC ATTGCAAAGC CCATAAAATA CACGTTTATG AGTTTCTTTG ACGAGAAGCC GAAAATTCAT TCAGGACCTT TTGAGGGGCT TATTCCCTTT TTTGAGCGGC GCTACAAGGA ATCCACTTCC GATTATGTCC GAACTGAAAT CGAAAGCTTT ATGAGCGAGC ATGATTGCCC TTCCTGCAAA GGAAAGCGCC TCAAGCCGGA GGCTTTAGCG GTGACTGTAG GGGAGCTATC CATCGATGAT TATACCCGCT TGCCGATTAC AGAAGCGTTG GAGTTTATCA CCCAATTGCA GCTTAGTGAA AAAGAGCAGA CTATCGCCCG GCAAATTCTC AAGGAGGTTC GGGAACGCCT GGGCTTCTTA GTCAATGTAG GGCTGGATTA TCTTACCCTG CATCGGGCGG CGGGGACCCT TTCCGGCGGA GAAGCTCAGC GGATTCGGCT GGCCACTCAG ATTGGTTCCA GTCTGACGGG AGTTCTCTAT GTTCTGGATG AGCCCAGCAT CGGCTTGCAC CAGAGAGATA ATGAAAAGCT CCTGACGGCT TTAAAGCATT TACGGGATTT AGGCAATACC TTGCTGGTGG TTGAGCATGA TGAGGATACC ATGCTGACTG CGGATCATAT CATCGATATC GGTCCGGGAG CGGGAGCCCA TGGCGGGCGG ATTATTGCCG AAGGAAAGAT TGAGGAGATC AAAGCCAATG TTGAATCCAT CACCGGGCAA TATTTGAACG GCACCCGGAG AATTCCTGTT CCTGCTGAAA GAAGAAAGCT CAACGGCAAG TGGCTGGAGG TTAAAGGAGC CCGGGAAAAT AATCTGAAGA ACATCAATGT CCGCATTCCT CTTGGCGTTT TTAATGTGGT CACAGGTGTA TCGGGTTCGG GAAAAAGCAC CTTGGTCAAT GAGATTGTTT ATAAGACCTT GGCCACCAAG CTTAATAAAG CGACGAAGCT GCGCGCCGGG CTCCATAAGG CTGTTGAAGG TTTGGAGCAT CTGGATAAGG TCATAGATAT CGACCAATCC CCGATCGGCC GCTCGCCCCG TTCCAATCCT GCCACTTACA CTGGAGTATT TGATTATATT CGTGAACTTT TCTCCCATAC TCCCGAGGCT AAAATGCGTG GTTATGCTAC CGGGCGCTTT AGTTTCAATG TCAAGGGCGG GCGCTGTGAA GCTTGTAAAG GGGATGGTAT CATCAAGATT GAGATGCACT TCCTCCCGGA TGTCTATGTT CCTTGTGAGG TTTGCCGGGG AGCCCGCTAT AACCGCGAGA CCCTGGAAGT GAAATATAAG GGAAAAAGCA TTGCGGAAAT CCTGGATATG ACGGTGGATG AGGCGGTGGA ATTTTTCCAG GCTGTTCCCC GGATTTTACG GAAGATGCAA ACCCTGCAGG ATGTGGGGCT GGGTTATATC CGGCTCGGTC AGCCGGCGAC TACCCTGTCC GGTGGTGAGG CTCAGCGGAT TAAACTGGCC ACTGAACTCA GCCGGCGCAG CACGGGCAAG ACGATCTATA TTTTGGATGA GCCGACCACG GGGCTGCATA TGGCCGATGT GGATCGTTTG CTGGAAGTGC TGCACCGCCT TGTGGATGGG GGCGATACCG TCCTGGTCAT TGAGCATAAC CTGGATGTGA TCAAGACTGC GGATTATCTC ATTGATCTTG GTCCGGAAGG GGGCAGCGGC GGAGGCCGGG TGGTCGTTAC AGGAACCCCG GAAGAAGTTG CCGCTTGCCC AACATCTTAC ACCGGCAAGT TCCTCAAAAA ATATCTGAGC TGA
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Protein sequence | MTQNFIKVRG ARAHNLKNIN VDIPRDQLVV VTGLSGSGKS SLAFDTIYAE GQRRYVESLS AYARMFLGQM DKPDVDYIEG LSPAISIDQK TTNRNPRSTV GTVTEVYDYL RLLYARVGHP HCPQCGREIS QQTVQQMVDQ IMVYPERTKL QILAPLVKGK KGEHVKVLED ARKAGYVRVR VDGENRDLSE EIKLEKNKKH SIEVVVDRIA LKPDSAVRLA DSLETALKLG EGNVLVDIID NTEILFSENF ACPDCGIALE EISPRLFSFN SPYGACPDCT GLGANLEVDI DLIIPNKKLS LGEGAIVPWA KSQSSYYPAM MAAVSEALGF TMDTPLAELS EEQWKGLLYG IAKPIKYTFM SFFDEKPKIH SGPFEGLIPF FERRYKESTS DYVRTEIESF MSEHDCPSCK GKRLKPEALA VTVGELSIDD YTRLPITEAL EFITQLQLSE KEQTIARQIL KEVRERLGFL VNVGLDYLTL HRAAGTLSGG EAQRIRLATQ IGSSLTGVLY VLDEPSIGLH QRDNEKLLTA LKHLRDLGNT LLVVEHDEDT MLTADHIIDI GPGAGAHGGR IIAEGKIEEI KANVESITGQ YLNGTRRIPV PAERRKLNGK WLEVKGAREN NLKNINVRIP LGVFNVVTGV SGSGKSTLVN EIVYKTLATK LNKATKLRAG LHKAVEGLEH LDKVIDIDQS PIGRSPRSNP ATYTGVFDYI RELFSHTPEA KMRGYATGRF SFNVKGGRCE ACKGDGIIKI EMHFLPDVYV PCEVCRGARY NRETLEVKYK GKSIAEILDM TVDEAVEFFQ AVPRILRKMQ TLQDVGLGYI RLGQPATTLS GGEAQRIKLA TELSRRSTGK TIYILDEPTT GLHMADVDRL LEVLHRLVDG GDTVLVIEHN LDVIKTADYL IDLGPEGGSG GGRVVVTGTP EEVAACPTSY TGKFLKKYLS
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