| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4725 |
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| Symbol | |
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| ID | 7261754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 5044970 |
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| End bp | 5046271 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643564636 |
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| Product | Peptidoglycan-binding domain 1 protein |
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| Protein accession | YP_002461156 |
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| Protein GI | 219670721 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein
[COG3858] Predicted glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATGT TACGCAGAGG GTCCCGCGGC AACGATGTCG CCGAAGTCCA GGTCCGCTTA
AGTGAGCTGG GATACATCCC CGGACCCATT GATGGGATCT TTGGCCCTAA GACGGAGGCG
GCTGTCATCC GCTTTCAGAA GGACCGGGGA CTGAACCCCG ACGGTATTGT CGGCCCCCTT
ACTTATCAGG CCCTCTTTCA GCCCGGGCCA CAACCAGGCT ACGTCCTCTA TACCATCAAA
GCCGGAGATA CCTTCTACAA GCTTTCCCTG GCCTTCGGAG TATCCCTCAA TGAAATTATC
GCCGCCAACC CCGGTGTCGA TCCCTACCAA TTGCGCATCG GCCAGCAGGT CAGGATACCT
AAAGGAGGAC CGGGAAGACG ACATACTTTT TCGGCCTGGA TTCCTTATTG GGTACAGCAG
GAGGCCATGG CCGTCGTTCG CCAGCATGCC GAACTCATGA CAACCCTTTC TCCCTTCTGG
TATGAACTCA CCCCTACAGG CGATTTGCTC CTTTATCCCA ATGCCGAAGA CTCCTCCCTC
ATTGAATTCG CACGTTCCCG GGGCATCGAG CTGATCCCTC TGGTCGCCAA TAATTACGAT
CGGCAATTGA TCTCCACCGT ATTGAACAAC CCTGACCTCC GTCAACGCAA TATCGCTCAA
ATCGTCAATA AGGTTCGTTC CATGAATTAT ACCGGAATCG AGATTGATTA TGAGAATATT
GCCGCCGCCG ACCGGGAGCT CTTTGTCCTT TTCCTGAGAG AGCTTAAAGC TGCACTGGCG
CCGTATAACA AAAAACTCTA CGTCGCTATC CAAGCGAAAA CCCGTGCCGA TGAGCCCGTC
AGTATCGGCC ACGATTATGG GGGGATCGGC GCTGCGGTGG ATGTTGTCCG CCTCATGCTC
TATGATTACA GCTGGGATAA TCCCGGACCC ATTGCCCCAG CCAGCTGGAT TCGCCAGGTT
CTGGATTATG CAGTGACCGT CATCCCCCCC GCCAAACTGG AAGCCGGCTT GCCCACCTAT
GGTTATGATT GGGGAACCAC CCGGAGAAGC ATTACCTATG ACGACGCCAT TCGTCTGGCT
CAGCAGCATG GAGCCCAAAT TATCCAGGAT CCCCAAAGAG GCCCCCACTT CAACTATACT
GACGCCGACG GCATAGCTCA CCAGGTCTGG TTTACCAATG CCCTGAACTT CGCTACTTTC
GTGGACATCG TCAATCAGTA CAACCTCCGG GGCATATCCA TCTGGCATCC CGGCGGCGAC
GATCCCCAGA TCTACACCGT GATCCAGGAC CGGCTGGAGT AA
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| Protein sequence | MRMLRRGSRG NDVAEVQVRL SELGYIPGPI DGIFGPKTEA AVIRFQKDRG LNPDGIVGPL
TYQALFQPGP QPGYVLYTIK AGDTFYKLSL AFGVSLNEII AANPGVDPYQ LRIGQQVRIP
KGGPGRRHTF SAWIPYWVQQ EAMAVVRQHA ELMTTLSPFW YELTPTGDLL LYPNAEDSSL
IEFARSRGIE LIPLVANNYD RQLISTVLNN PDLRQRNIAQ IVNKVRSMNY TGIEIDYENI
AAADRELFVL FLRELKAALA PYNKKLYVAI QAKTRADEPV SIGHDYGGIG AAVDVVRLML
YDYSWDNPGP IAPASWIRQV LDYAVTVIPP AKLEAGLPTY GYDWGTTRRS ITYDDAIRLA
QQHGAQIIQD PQRGPHFNYT DADGIAHQVW FTNALNFATF VDIVNQYNLR GISIWHPGGD
DPQIYTVIQD RLE
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